Factsheet for TraesCS5A01G395200.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

plastid: 16481623
plastid: 16595579
plastid: 18419817
golgi: 23128297

msms PMID: 18419817 doi

FM Dupont

Western Regional Research Center, United States Department of Agriculture, Agricultural Research Service, 800 Buchanan Street, Albany, CA 94710K, USA.

msms PMID: 16595579 doi

Y Balmer, WH Vensel, FM DuPont, BB Buchanan, WJ Hurkman

Department of Plant and Microbial Biology, University of California, 111 Koshland Hall, Berkeley, CA 94720, USA.

msms PMID: 16481623 doi

Y Balmer, WH Vensel, N Cai, W Manieri, P Schürmann, WJ Hurkman, BB Buchanan

Department of Plant and Biology, University of California, 111 Koshland Hall, Berkeley, CA 94720, USA.

msms, gfp PMID: 23128297 doi

M Suliman, AL Chateigner-Boutin, M Francin-Allami, A Partier, B Bouchet, J Salse, C Pont, J Marion, H Rogniaux, D Tessier, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G404500.1	Wheat	golgi, plastid	96.69	96.69
HORVU5Hr1G096390.5	Barley	cytosol, plastid	91.63	96.52
TraesCS5B01G400000.1	Wheat	golgi, plastid	96.28	95.98
Os03t0758100-01	Rice	cytosol, plasma membrane, plastid	78.51	85.01
KXG37513	Sorghum	plastid	82.54	81.12
Zm00001d034074_P003	Maize	plastid	81.3	79.74
GSMUA_Achr4P32600_001	Banana	plastid	72.11	75.3
VIT_01s0011g00730.t01	Wine grape	plastid	71.18	70.23
Solyc05g012510.2.1	Tomato	plastid	69.01	69.08
PGSC0003DMT400072963	Potato	cytosol, extracellular, plastid	69.42	68.92
KRG89496	Soybean	plastid	67.67	66.97
TraesCS3A01G366400.1	Wheat	cytosol, plastid	54.75	63.7
TraesCS3A01G366300.1	Wheat	cytosol	54.13	62.98

Protein Annotations

KEGG:00500+2.4.1.1	MapMan:3.2.3.3.4	Gene3D:3.40.50.2000	GO:GO:0003674	GO:GO:0003824	GO:GO:0004645
GO:GO:0005488	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0008184	GO:GO:0016740
GO:GO:0030170	InterPro:Glycg_phsphrylas	InterPro:Glyco_trans_35	PFAM:PF00343	PIRSF:PIRSF000460	ScanProsite:PS00102
PANTHER:PTHR11468	PANTHER:PTHR11468:SF14	InterPro:Pyridoxal_P_attach_site	SUPFAM:SSF53756	TIGRFAMs:TIGR02093	EnsemblPlantsGene:TraesCS5A01G395200
EnsemblPlants:TraesCS5A01G395200.1	TIGR:cd04300	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr5A:-:590597251..590605262

Molecular Weight (calculated)

108528.0 Da

IEP (calculated)

5.293

GRAVY (calculated)

-0.375

Length

968 amino acids

Sequence
(BLAST)

001: MATASPPLAT PFRPLAVAGG SGGLVVGARA VVPPRRGRRG FVVRSVASDR EVRGPAPTEE ELSAVLTSID SSAIASNIQH HADFTPLFSP EHSSPLKAYH
101: ATAKSVFDSL ILNWNATYDY YNKVNAKQAY YLSMEFLQGR ALTNAIGNLE LTGQYAEALK QLGQNLEDVA SQEPDPALGN GGLGRLASCF LDSMATLNYP
201: AWGYGLRYRY GLFKQIITKD GQEEVAENWL EMGNPWEIVR NDVSYPLKFY GKVVEGTDGR KHWIGGENIK AVAHDVPIPG YKTKTTNNLR LWSTTVPSQN
301: FDLGAFNAGD HVKANEAHLN AEKICHVLYP GDESSEGKIL RLKQQYTLCS ASLQDIISRF ESRAGDSLNW EDFPSKVAVQ MNDTHPTLCI PELMRILMDV
401: KGLSWNESWS ITERTVAYTN HTVLPEALEK WSLDIMQKLL PRHVEIIERI DEELMNTIVS KYGTADISLL KQKLKDMRIL DNVDLPASVA KLFIKPKEKK
501: GKLLVESLES IAEADEKTES EEEENILSET TEKKGESDSE EAPDAEKEDP EYELDPFTKY DPQLPRVVRM ANLCVVGGHS VNGVAEIHSE IVKQDVFNSF
601: YEMWPTKFQN KTNGVTPRRW IRFCNPELST IISKWIGSDD WILNTDKLAG LKKFADDEDL QSEWRTAKRN NKMKVVSLIR DKTGYVVSPD AMFDVQVKRI
701: HEYKRQLLNI LGIIYRYKKM KEMSAKDRIK SFVPRVCIFG GKAFATYVQA KRIVKFITDV AATVNYDPDI GDLLKVVFVP DYNVSVAETL IPASELSQHI
801: STAGMEASGT SNMKFAMNGC ILIGTLDGAN VEIREEVGEE NFFLFGAHAP EIAGLRQERA EGKFVPDPRF EEVKEYVRSG IFGTGNYDEL MGSLEGNEGY
901: GRADYFLVGK DFPSYIECQE KVDEAYRDQK LWTRMSILNT AGSPKFSSDR TIHEYAKDIW GISPVIMP

Best Arabidopsis Sequence Match ( AT3G29320.1 )
(BLAST)

001: MDTMRISGVS TGAEVLIQCN SLSSLVSRRC DDGKWRTRMF PARNRDLRPS PTRRSFLSVK SISSEPKAKV TDAVLDSEQE VFISSMNPFA PDAASVASSI
101: KYHAEFTPLF SPEKFELPKA FFATAQSVRD ALIMNWNATY EYYNRVNVKQ AYYLSMEFLQ GRALSNAVGN LGLNSAYGDA LKRLGFDLES VASQEPDPAL
201: GNGGLGRLAS CFLDSMATLN YPAWGYGLRY KYGLFKQRIT KDGQEEAAED WLELSNPWEI VRNDVSYPIK FYGKVVFGSD GKKRWIGGED IVAVAYDVPI
301: PGYKTKTTIN LRLWSTKAPS EDFDLSSYNS GKHTEAAEAL FNAEKICFVL YPGDESTEGK ALRLKQQYTL CSASLQDIVA RFETRSGGNV NWEEFPEKVA
401: VQMNDTHPTL CIPELMRILM DLKGLSWEDA WKITQRTVAY TNHTVLPEAL EKWSLELMEK LLPRHVEIIE KIDEELVRTI VSEYGTADPD LLEEKLKAMR
501: ILENVELPSA FADVIVKPVN KPVTAKDAQN GVKTEQEEEK TAGEEEEDEV IPEPTVEPPK MVRMANLAVV GGHAVNGVAE IHSEIVKQDV FNDFVQLWPE
601: KFQNKTNGVT PRRWIRFCNP YLSDIITNWI GTEDWVLNTE KVAELRKFAD NEDLQSEWRA AKKKNKLKVV SLIKERTGYT VSPDAMFDIQ IKRIHEYKRQ
701: LLNILGIVYR YKKMKEMSAS EREKAFVPRV CIFGGKAFAT YVQAKRIVKF ITDVASTINH DPEIGDLLKV IFVPDYNVSV AELLIPASEL SQHISTAGME
801: ASGTSNMKFS MNGCVLIGTL DGANVEIREE VGEENFFLFG AKADQIVNLR KERAEGKFVP DPTFEEVKKF VGSGVFGSNS YDELIGSLEG NEGFGRADYF
901: LVGKDFPSYI ECQEKVDEAY RDQKRWTRMS IMNTAGSFKF SSDRTIHEYA KDIWNIKQVE LP

Arabidopsis Description

PHS1Alpha-glucan phosphorylase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIB2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.