CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_01s0011g00730.t01	Wine grape	plastid	74.54	74.31
Os03t0758100-01	Rice	cytosol, plasma membrane, plastid	65.64	71.81
GSMUA_Achr4P32600_001	Banana	plastid	67.89	71.63
Solyc05g012510.2.1	Tomato	plastid	70.65	71.46
PGSC0003DMT400072963	Potato	cytosol, extracellular, plastid	70.14	70.36
HORVU5Hr1G096390.5	Barley	cytosol, plastid	65.95	70.19
KRH18405	Soybean	endoplasmic reticulum, plastid	69.63	69.63
KRG93626	Soybean	plastid	69.43	69.22
TraesCS5D01G404500.1	Wheat	golgi, plastid	67.59	68.29
TraesCS5A01G395200.1	Wheat	plastid	66.97	67.67
TraesCS5B01G400000.1	Wheat	golgi, plastid	66.87	67.35
KRG89536	Soybean	cytosol, endoplasmic reticulum, vacuole	5.62	67.07
KXG37513	Sorghum	plastid	67.18	66.7
Zm00001d034074_P003	Maize	plastid	65.54	64.94
KRH46442	Soybean	nucleus	51.84	59.93
KRG98345	Soybean	cytosol, nucleus	51.23	59.22
KRH21364	Soybean	plastid	42.23	41.22

Protein Annotations

KEGG:00500+2.4.1.1	EntrezGene:100818065	MapMan:3.2.3.3.4	Gene3D:3.40.50.2000	EMBL:ACUP02012213	EnsemblPlantsGene:GLYMA_20G026700
GO:GO:0003674	GO:GO:0003824	GO:GO:0004645	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005975	GO:GO:0005980	GO:GO:0006091	GO:GO:0008150
GO:GO:0008152	GO:GO:0008184	GO:GO:0009056	GO:GO:0009987	GO:GO:0016740	GO:GO:0016757
GO:GO:0030170	GO:GO:0102250	GO:GO:0102499	InterPro:Glycg_phsphrylas	InterPro:Glyco_trans_35	UniProt:K7N0Z8
EnsemblPlants:KRG89496	ProteinID:KRG89496	ProteinID:KRG89496.1	ProteinID:KRG89497.1	PFAM:PF00343	PIRSF:PIRSF000460
ScanProsite:PS00102	PANTHER:PTHR11468	PANTHER:PTHR11468:SF14	MetaCyc:PWY-5941	MetaCyc:PWY-6731	MetaCyc:PWY-6737
MetaCyc:PWY-7238	InterPro:Pyridoxal_P_attach_site	SUPFAM:SSF53756	TIGRFAMs:TIGR02093	UniParc:UPI000233DA88	SEG:seg

Description

hypothetical protein

Coordinates

chr20:-:2936418..2944925

Molecular Weight (calculated)

111870.0 Da

IEP (calculated)

5.005

GRAVY (calculated)

-0.413

Length

978 amino acids

Sequence
(BLAST)

001: MAALPFSTTC RHSNSPLHHN SKTSFIGFSQ RNNIWQLFVI TKSNSRRAIR KLCVKNVTSD KKQELEEPLN EQDTFNEFVP DSASIASSIK FHAEFTSPFS
101: PEKFELNKAF FATAESVRDS LIINWNATND YYERMNVKQA YYMSMEYLQG RALLNAIGNL QLSGPYAEAL RKLGHNLEDV ANKEPDAALG NGGLGRLASC
201: FLDSLATLNY PAWGYGLRYK YGLFKQHITK DGQVEVAENW LEMGNPWEIL KNDVSYPVKF YGEVISGPNG SKQWVGGENI LAVAYDVPIP GYKTRTTINL
301: RLWSTKVSPE EFDLQAYNSG DHAKAYAVMK NAEKICYVLY PGDESIDGKT LRLKQQYTLC SASLQDIFAR FERRLGKRVN WDTLPDKVVV QMNDTHPTLC
401: IPEIIRILVD VKGLSWEKAW NITKRTVAYT NHTILPEALE KWSLTLLQDL LPRHMEIIRK IDEELINEII SEYGIDDLDL FQQRLKKMRI LENIELPNSV
501: MELLSITEET PAVDPVKEID VDDTDVKATE KEDGDDDDDY EVVEEEQEED NEEPSVEEDT SNKIELKFKV DPKLPMMVRM ANLCVVGGFS VNGVAEIHSK
601: IVKEEVFDEF YKLWPEKFQN KTNGVTPRRW IRFCNPDLSK IITKWIGTED WVTDLEKLAI LRKFADNEDL QLEWIEAKRR NKIRVASFLK EKTGYVVNPN
701: AMFDVQVKRI HEYKRQLLNI LGIVYRYKKM KELSAEERKD MFVPRVCIFG GKAFATYVQA KRIVKFITDV GATINSDPEI GDLLKVVFVP DYNVSVAEML
801: IPGSESSQHI STAGMEASGT SNMKFAMNGC IVIGTLDGAN VEIREEVGED NFFLFGARAQ EIVGLRKERV EGKFVPDPRF EEVKAYVRSG VFGPYNYEEL
901: MGSLEGNEGY GRADYFLVGK DFPSYLECQE EVDKAYHDQK RWTKMSILNT AGSFKFSSDR TIHEYARDIW RIEPVELA

Best Arabidopsis Sequence Match ( AT3G29320.1 )
(BLAST)

001: MDTMRISGVS TGAEVLIQCN SLSSLVSRRC DDGKWRTRMF PARNRDLRPS PTRRSFLSVK SISSEPKAKV TDAVLDSEQE VFISSMNPFA PDAASVASSI
101: KYHAEFTPLF SPEKFELPKA FFATAQSVRD ALIMNWNATY EYYNRVNVKQ AYYLSMEFLQ GRALSNAVGN LGLNSAYGDA LKRLGFDLES VASQEPDPAL
201: GNGGLGRLAS CFLDSMATLN YPAWGYGLRY KYGLFKQRIT KDGQEEAAED WLELSNPWEI VRNDVSYPIK FYGKVVFGSD GKKRWIGGED IVAVAYDVPI
301: PGYKTKTTIN LRLWSTKAPS EDFDLSSYNS GKHTEAAEAL FNAEKICFVL YPGDESTEGK ALRLKQQYTL CSASLQDIVA RFETRSGGNV NWEEFPEKVA
401: VQMNDTHPTL CIPELMRILM DLKGLSWEDA WKITQRTVAY TNHTVLPEAL EKWSLELMEK LLPRHVEIIE KIDEELVRTI VSEYGTADPD LLEEKLKAMR
501: ILENVELPSA FADVIVKPVN KPVTAKDAQN GVKTEQEEEK TAGEEEEDEV IPEPTVEPPK MVRMANLAVV GGHAVNGVAE IHSEIVKQDV FNDFVQLWPE
601: KFQNKTNGVT PRRWIRFCNP YLSDIITNWI GTEDWVLNTE KVAELRKFAD NEDLQSEWRA AKKKNKLKVV SLIKERTGYT VSPDAMFDIQ IKRIHEYKRQ
701: LLNILGIVYR YKKMKEMSAS EREKAFVPRV CIFGGKAFAT YVQAKRIVKF ITDVASTINH DPEIGDLLKV IFVPDYNVSV AELLIPASEL SQHISTAGME
801: ASGTSNMKFS MNGCVLIGTL DGANVEIREE VGEENFFLFG AKADQIVNLR KERAEGKFVP DPTFEEVKKF VGSGVFGSNS YDELIGSLEG NEGFGRADYF
901: LVGKDFPSYI ECQEKVDEAY RDQKRWTRMS IMNTAGSFKF SSDRTIHEYA KDIWNIKQVE LP

Arabidopsis Description

PHS1Alpha-glucan phosphorylase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIB2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.