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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi, plastid

Predictor Summary:
  • plastid 8
Predictors GFP MS/MS Papers
Winner Takes All:golgi, plastid
Any Predictor:plastid
ChloroP:plastid
iPSORT:plastid
MultiLoc:plastid
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:plastid
golgi: 25769308
msms PMID: 25769308 doi
AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré
INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5B01G400000.1 Wheat golgi, plastid 97.52 97.22
HORVU5Hr1G096390.5 Barley cytosol, plastid 92.25 97.17
TraesCS5A01G395200.1 Wheat plastid 96.69 96.69
Os03t0758100-01 Rice cytosol, plasma membrane, plastid 79.13 85.68
KXG37513 Sorghum plastid 83.26 81.83
Zm00001d034074_P003 Maize plastid 82.23 80.65
GSMUA_Achr4P32600_001 Banana plastid 72.73 75.94
VIT_01s0011g00730.t01 Wine grape plastid 71.9 70.95
Solyc05g012510.2.1 Tomato plastid 69.01 69.08
PGSC0003DMT400072963 Potato cytosol, extracellular, plastid 69.52 69.03
KRG89496 Soybean plastid 68.29 67.59
TraesCS3D01G359300.1 Wheat cytosol 54.86 63.82
TraesCS3D01G359200.1 Wheat cytosol 54.75 63.7
Protein Annotations
KEGG:00500+2.4.1.1MapMan:3.2.3.3.4Gene3D:3.40.50.2000GO:GO:0003674GO:GO:0003824GO:GO:0004645
GO:GO:0005488GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0008184GO:GO:0016740
GO:GO:0030170InterPro:Glycg_phsphrylasInterPro:Glyco_trans_35PFAM:PF00343PIRSF:PIRSF000460ScanProsite:PS00102
PANTHER:PTHR11468PANTHER:PTHR11468:SF14InterPro:Pyridoxal_P_attach_siteSUPFAM:SSF53756TIGRFAMs:TIGR02093EnsemblPlantsGene:TraesCS5D01G404500
EnsemblPlants:TraesCS5D01G404500.1TIGR:cd04300SEG:seg:::
Description
No Description!
Coordinates
chr5D:-:469553632..469560617
Molecular Weight (calculated)
108332.0 Da
IEP (calculated)
5.343
GRAVY (calculated)
-0.381
Length
968 amino acids
Sequence
(BLAST)
001: MATASPPLAT AFRPLAAGGG TGGGGAHAAG WVAPRRGRRG FVVRSVASDR EVRGPASTEE ELSAVLTSID SSAIASNIQH HADFTPLFSP EHSSPLKAYH
101: ATAKSVFDSL IINWNATYDY YNKVNAKQAY YLSMEFLQGR ALTNAIGNLE LTGQYAEALK QLGHNLEDVA SQEPDPALGN GGLGRLASCF LDSMATLNYP
201: AWGYGLRYRY GLFKQIITKD GQEEVAENWL EMGNPWEIVR NDVSYPVKFY GKVVEGTDGR KHWIGGENIK AVAHDVPIPG YKTKTTNNLR LWSTTVPSQN
301: FDLGAFNAGD HAKANEAHLN AEKICHVLYP GDESSEGKIL RLKQQYTLCS ASLQDIISRF ESRAGDSLNW EDFPSKVAVQ MNDTHPTLCI PELMRILMDI
401: KGLSWNEAWS ITERTVAYTN HTVLPEALEK WSLDIMQKLL PRHVEIIETI DEELMNNIVS KYGTADISLL KQKLKDMRIL DNVDLPASVA KLFVKTKMKK
501: GKLLVESLES IAEADEKTEP EEEENILSET TEKKGESDSE EAPDAEKEDP EYELDPFAKY DPQLPRVVRM ANLCVVGGHS VNGVAEIHSE IVKQDVFNSF
601: YEMWPTKFQN KTNGVTPRRW IRFCNPELSA IISKWIGSDD WILNTDKLAG LKKFADDEDL QSEWRTAKRN NKMKVVSLIR DKTGYVVSPD AMFDVQVKRI
701: HEYKRQLLNI LGIVYRYKKM KEMSAKDRIK SFVPRVCIFG GKAFATYVQA KRIVKFITDV AATVNYDPDI GDLLKVVFVP DYNVSVAEKL IPASELSQHI
801: STAGMEASGT SNMKFAMNGC ILIGTLDGAN VEIREEVGEE NFFLFGAHAP EIAGLRQERA EGKFVPDPRF EEVKEYVRSG VFGTSNYDEL MGSLEGNEGY
901: GRADYFLVGK DFPSYIECQE KVDEAYRDQK LWTRMSILNT AGSPKFSSDR TIHEYAKDIW DISPVIMP
Best Arabidopsis Sequence Match ( AT3G29320.1 )
(BLAST)
001: MDTMRISGVS TGAEVLIQCN SLSSLVSRRC DDGKWRTRMF PARNRDLRPS PTRRSFLSVK SISSEPKAKV TDAVLDSEQE VFISSMNPFA PDAASVASSI
101: KYHAEFTPLF SPEKFELPKA FFATAQSVRD ALIMNWNATY EYYNRVNVKQ AYYLSMEFLQ GRALSNAVGN LGLNSAYGDA LKRLGFDLES VASQEPDPAL
201: GNGGLGRLAS CFLDSMATLN YPAWGYGLRY KYGLFKQRIT KDGQEEAAED WLELSNPWEI VRNDVSYPIK FYGKVVFGSD GKKRWIGGED IVAVAYDVPI
301: PGYKTKTTIN LRLWSTKAPS EDFDLSSYNS GKHTEAAEAL FNAEKICFVL YPGDESTEGK ALRLKQQYTL CSASLQDIVA RFETRSGGNV NWEEFPEKVA
401: VQMNDTHPTL CIPELMRILM DLKGLSWEDA WKITQRTVAY TNHTVLPEAL EKWSLELMEK LLPRHVEIIE KIDEELVRTI VSEYGTADPD LLEEKLKAMR
501: ILENVELPSA FADVIVKPVN KPVTAKDAQN GVKTEQEEEK TAGEEEEDEV IPEPTVEPPK MVRMANLAVV GGHAVNGVAE IHSEIVKQDV FNDFVQLWPE
601: KFQNKTNGVT PRRWIRFCNP YLSDIITNWI GTEDWVLNTE KVAELRKFAD NEDLQSEWRA AKKKNKLKVV SLIKERTGYT VSPDAMFDIQ IKRIHEYKRQ
701: LLNILGIVYR YKKMKEMSAS EREKAFVPRV CIFGGKAFAT YVQAKRIVKF ITDVASTINH DPEIGDLLKV IFVPDYNVSV AELLIPASEL SQHISTAGME
801: ASGTSNMKFS MNGCVLIGTL DGANVEIREE VGEENFFLFG AKADQIVNLR KERAEGKFVP DPTFEEVKKF VGSGVFGSNS YDELIGSLEG NEGFGRADYF
901: LVGKDFPSYI ECQEKVDEAY RDQKRWTRMS IMNTAGSFKF SSDRTIHEYA KDIWNIKQVE LP
Arabidopsis Description
PHS1Alpha-glucan phosphorylase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIB2]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.