Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 2
- golgi 3
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d012737_P001 | Maize | endoplasmic reticulum | 84.16 | 76.54 |
| TraesCS3A01G291300.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion, peroxisome | 67.87 | 64.94 |
| TraesCS3B01G325900.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome, plastid | 67.42 | 64.5 |
| TraesCS3D01G291000.1 | Wheat | plasma membrane | 66.97 | 61.92 |
| GSMUA_Achr4P02770_001 | Banana | endoplasmic reticulum, extracellular, mitochondrion, plasma membrane | 47.06 | 48.6 |
| KRH55830 | Soybean | plasma membrane | 35.75 | 41.8 |
| AT2G42390.1 | Thale cress | plasma membrane | 39.82 | 41.51 |
| PGSC0003DMT400027390 | Potato | endoplasmic reticulum, plasma membrane | 37.1 | 40.8 |
| Bra004690.1-P | Field mustard | plasma membrane | 38.91 | 39.63 |
| VIT_12s0028g02620.t01 | Wine grape | plasma membrane | 36.65 | 39.51 |
| CDY64519 | Canola | extracellular, plasma membrane | 38.91 | 39.45 |
| Solyc10g008100.2.1 | Tomato | plasma membrane | 35.29 | 38.61 |
| KRH25690 | Soybean | plastid | 36.2 | 35.4 |
| KXG32260 | Sorghum | endoplasmic reticulum | 36.65 | 13.24 |
Protein Annotations
| EnsemblPlants:OQU87548 | EnsemblPlantsGene:SORBI_3003G297500 | GO:GO:0005575 | GO:GO:0006491 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0019538 | InterPro:PRKCSH_N | PANTHER:PTHR12630 |
| PFAM:PF12999 | ProteinID:OQU87548 | ProteinID:OQU87548.1 | SEG:seg | SignalP:SignalP-noTM | TMHMM:TMhelix |
| UniParc:UPI0009DC919D | UniProt:A0A1W0VZI7 | MapMan:35.1 | : | : | : |
Description
hypothetical protein
Coordinates
chr3:-:62934835..62936350
Molecular Weight (calculated)
24402.2 Da
IEP (calculated)
8.003
GRAVY (calculated)
-0.279
Length
221 amino acids
Sequence
(BLAST)
(BLAST)
001: MWTPRPSRRI VSPAPATLLL RLLLLAGAAN AAPPLVGVSP QDEAYFATQV IACRDGSGSF PRSRLNDGYC DCADGTDEPG TSACPEGKFY CRNIGDTPRL
101: LFSSFVNDKI CDCCDGSDEY ESGIHCQNTC RNIKYIAEAA DGGSDLSVTH LDANTNEFMG KHAIAMEDHI QNNNSKDLVQ KIRGLRMALV FELGLLVCIF
201: AFCIARRRTR TRRRQHILKR K
101: LFSSFVNDKI CDCCDGSDEY ESGIHCQNTC RNIKYIAEAA DGGSDLSVTH LDANTNEFMG KHAIAMEDHI QNNNSKDLVQ KIRGLRMALV FELGLLVCIF
201: AFCIARRRTR TRRRQHILKR K
001: MLLQCVVLCS SLAVVVISVA STSPLVGVHP LDEKYFDSDV IKCKDGSKSF TRDRLNDNFC DCLDGTDEPG TSACPNGKFY CRNIGSSPKF VYSSRVNDRI
101: CDCCDGSDEY ESSIHCPNTC IMGGNVNYIY KPRANLKSIH LQLGSTPHPK EFYTIGNLQD MVKNLQGMKL VFALQMVFIG FLVILWMLRS RARSKRRRYL
201: LKNVPPINRS AN
101: CDCCDGSDEY ESSIHCPNTC IMGGNVNYIY KPRANLKSIH LQLGSTPHPK EFYTIGNLQD MVKNLQGMKL VFALQMVFIG FLVILWMLRS RARSKRRRYL
201: LKNVPPINRS AN
Arabidopsis Description
Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q9SLC0]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.