Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, endoplasmic reticulum, extracellular, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 4
- extracellular 3
- endoplasmic reticulum 3
- vacuole 2
- golgi 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU87548 | Sorghum | plasma membrane | 48.6 | 47.06 |
| AT2G42390.1 | Thale cress | plasma membrane | 44.86 | 45.28 |
| TraesCS3A01G291300.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion, peroxisome | 48.6 | 45.02 |
| PGSC0003DMT400027390 | Potato | endoplasmic reticulum, plasma membrane | 42.06 | 44.78 |
| TraesCS3B01G325900.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome, plastid | 48.13 | 44.59 |
| KRH55830 | Soybean | plasma membrane | 39.25 | 44.44 |
| VIT_12s0028g02620.t01 | Wine grape | plasma membrane | 42.06 | 43.9 |
| TraesCS3D01G291000.1 | Wheat | plasma membrane | 48.6 | 43.51 |
| Solyc10g008100.2.1 | Tomato | plasma membrane | 40.65 | 43.07 |
| Zm00001d012737_P001 | Maize | endoplasmic reticulum | 47.66 | 41.98 |
| CDY64519 | Canola | extracellular, plasma membrane | 42.06 | 41.28 |
| Bra004690.1-P | Field mustard | plasma membrane | 41.59 | 41.01 |
| KRH25690 | Soybean | plastid | 39.72 | 37.61 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum | 34.58 | 26.81 |
| GSMUA_Achr5P27690_001 | Banana | endoplasmic reticulum | 35.98 | 11.31 |
| GSMUA_Achr10P... | Banana | nucleus | 10.28 | 6.96 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr4P02770_001 | EnsemblPlants:GSMUA_Achr4T02770_001 | EnsemblPlantsGene:GSMUA_Achr4G02770_001 | GO:GO:0005575 | GO:GO:0006491 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0019538 | InterPro:Glucosidase_2_bsu |
| InterPro:PRKCSH_N | PANTHER:PTHR12630 | PANTHER:PTHR12630:SF10 | PFAM:PF12999 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI0002949DEC | UniProt:M0SKJ4 | MapMan:35.1 | : | : | : |
Description
Putative Glucosidase 2 subunit beta [Source:GMGC_GENE;Acc:GSMUA_Achr4G02770_001]
Coordinates
chr4:+:2319966..2321715
Molecular Weight (calculated)
24058.5 Da
IEP (calculated)
6.121
GRAVY (calculated)
-0.407
Length
214 amino acids
Sequence
(BLAST)
(BLAST)
001: MERVSVGRIS LMGARPDGCL LCFAVLALSS SVLLSASPLR GVSPQDEMYL AGPVIGCRDG SRTFTKDRLN DGFCDCPDGT DEPGTSACPE SKFYCRNLGA
101: KPEFVFSSRV NDYICDCCDG SDEYHSGVHC PNTCRKDQNV SEESTDDSTS ETNNLDDTNE EDRKIRVDRE DLIQKLRGLK VVLVIQVLSA MLIIVLCLYH
201: RRSRFRRRRY HLKW
101: KPEFVFSSRV NDYICDCCDG SDEYHSGVHC PNTCRKDQNV SEESTDDSTS ETNNLDDTNE EDRKIRVDRE DLIQKLRGLK VVLVIQVLSA MLIIVLCLYH
201: RRSRFRRRRY HLKW
001: MLLQCVVLCS SLAVVVISVA STSPLVGVHP LDEKYFDSDV IKCKDGSKSF TRDRLNDNFC DCLDGTDEPG TSACPNGKFY CRNIGSSPKF VYSSRVNDRI
101: CDCCDGSDEY ESSIHCPNTC IMGGNVNYIY KPRANLKSIH LQLGSTPHPK EFYTIGNLQD MVKNLQGMKL VFALQMVFIG FLVILWMLRS RARSKRRRYL
201: LKNVPPINRS AN
101: CDCCDGSDEY ESSIHCPNTC IMGGNVNYIY KPRANLKSIH LQLGSTPHPK EFYTIGNLQD MVKNLQGMKL VFALQMVFIG FLVILWMLRS RARSKRRRYL
201: LKNVPPINRS AN
Arabidopsis Description
Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q9SLC0]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.