Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 6
- golgi 6
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc10g008100.2.1 | Tomato | plasma membrane | 83.08 | 82.67 |
| VIT_12s0028g02620.t01 | Wine grape | plasma membrane | 52.74 | 51.71 |
| Bra004690.1-P | Field mustard | plasma membrane | 52.24 | 48.39 |
| CDY64519 | Canola | extracellular, plasma membrane | 52.24 | 48.17 |
| AT2G42390.1 | Thale cress | plasma membrane | 50.25 | 47.64 |
| KRH55830 | Soybean | plasma membrane | 44.28 | 47.09 |
| GSMUA_Achr4P02770_001 | Banana | endoplasmic reticulum, extracellular, mitochondrion, plasma membrane | 44.78 | 42.06 |
| KRH25690 | Soybean | plastid | 46.27 | 41.15 |
| OQU87548 | Sorghum | plasma membrane | 40.8 | 37.1 |
| TraesCS3A01G291300.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion, peroxisome | 39.3 | 34.2 |
| TraesCS3B01G325900.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome, plastid | 39.3 | 34.2 |
| Zm00001d012737_P001 | Maize | endoplasmic reticulum | 40.8 | 33.74 |
| TraesCS3D01G291000.1 | Wheat | plasma membrane | 39.8 | 33.47 |
| PGSC0003DMT400011814 | Potato | endoplasmic reticulum | 36.32 | 11.55 |
Protein Annotations
| EntrezGene:102587999 | MapMan:35.1 | GO:GO:0005575 | GO:GO:0006491 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0019538 | InterPro:Glucosidase_2_bsu | UniProt:M1APM4 |
| PFAM:PF12999 | EnsemblPlantsGene:PGSC0003DMG400010561 | PGSC:PGSC0003DMG400010561 | EnsemblPlants:PGSC0003DMT400027390 | InterPro:PRKCSH_N | PANTHER:PTHR12630 |
| PANTHER:PTHR12630:SF1 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI000296E60C | RefSeq:XP_006364107.1 | SEG:seg |
Description
Glucosidase II beta subunit [Source:PGSC_GENE;Acc:PGSC0003DMG400010561]
Coordinates
chr10:-:3365988..3370220
Molecular Weight (calculated)
22711.9 Da
IEP (calculated)
8.086
GRAVY (calculated)
-0.390
Length
201 amino acids
Sequence
(BLAST)
(BLAST)
001: METTTLTQLT SLLLLLSFFF FHVSNSSTDL PIGIHPLDEK YYASDVIKCK DGSNSFTIDR LNDDFCDCID GTDEPGTAAC PSGKFYCRNV GSTPKFLFSS
101: RVNDDICDCC DGSDEYDSDA NCPNTCVMGG DFSYQTRRYR SRRKHLDRIG GRNANEVNMA DSAQRLKGLK ILVLVQVALI IIFLVSRKLY RRSRSKRRHS
201: R
101: RVNDDICDCC DGSDEYDSDA NCPNTCVMGG DFSYQTRRYR SRRKHLDRIG GRNANEVNMA DSAQRLKGLK ILVLVQVALI IIFLVSRKLY RRSRSKRRHS
201: R
001: MLLQCVVLCS SLAVVVISVA STSPLVGVHP LDEKYFDSDV IKCKDGSKSF TRDRLNDNFC DCLDGTDEPG TSACPNGKFY CRNIGSSPKF VYSSRVNDRI
101: CDCCDGSDEY ESSIHCPNTC IMGGNVNYIY KPRANLKSIH LQLGSTPHPK EFYTIGNLQD MVKNLQGMKL VFALQMVFIG FLVILWMLRS RARSKRRRYL
201: LKNVPPINRS AN
101: CDCCDGSDEY ESSIHCPNTC IMGGNVNYIY KPRANLKSIH LQLGSTPHPK EFYTIGNLQD MVKNLQGMKL VFALQMVFIG FLVILWMLRS RARSKRRRYL
201: LKNVPPINRS AN
Arabidopsis Description
Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q9SLC0]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.