Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d019596_P001 | Maize | nucleus | 62.88 | 58.74 |
| TraesCS2B01G073000.1 | Wheat | nucleus | 49.69 | 46.15 |
| TraesCS2D01G056700.1 | Wheat | nucleus | 48.16 | 44.48 |
| HORVU2Hr1G012100.2 | Barley | nucleus | 49.39 | 44.48 |
| EER89016 | Sorghum | nucleus | 38.65 | 44.21 |
| TraesCS2A01G058000.1 | Wheat | nucleus | 46.63 | 44.06 |
| Os07t0461500-00 | Rice | cytosol | 47.85 | 42.98 |
| EES11661 | Sorghum | nucleus | 37.73 | 40.86 |
Protein Annotations
| MapMan:22.1.1.2 | UniProt:A0A1W0W3R6 | InterPro:Clathrin_L-chain | ncoils:Coil | GO:GO:0003674 | GO:GO:0005198 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005794 | GO:GO:0005886 |
| GO:GO:0006810 | GO:GO:0006886 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016192 | GO:GO:0030130 |
| GO:GO:0030132 | EnsemblPlants:OQU88983 | ProteinID:OQU88983 | ProteinID:OQU88983.1 | PANTHER:PTHR10639 | PANTHER:PTHR10639:SF7 |
| EnsemblPlantsGene:SORBI_3002G128700 | UniParc:UPI0009DC84E9 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr2:-:17952892..17954472
Molecular Weight (calculated)
35364.5 Da
IEP (calculated)
8.412
GRAVY (calculated)
-0.999
Length
326 amino acids
Sequence
(BLAST)
(BLAST)
001: MRRGHRFAAS YSSFGTVVSE DDLGGAAGDG GGYGVFGMPP YSNGGPAYGY AGSDANGVEH VMGAQDVMDG AAHVVGGIGI GGGGLDEDLF SGAADDGAVL
101: PPPEAMREEG ILRREWRRQN ASMLEEKERK ERERRDEIIA EAEQFKKSFL DKRRLNCETN RTHNRDREKL SLANQERFHK EADRQYWKAI AELVPHEIPG
201: LEKRGKRKEQ ERKPGIVVVQ GPKPGKATDL SRMRHVLVKL KEKPPAHMVP PSPPQAKEEE KKDGGKDAKK DGNKDEKKDG KQAAGPAEKK TDGSDDKAAV
301: STTAAGSPPV AAETPAEKAP EQPIKK
101: PPPEAMREEG ILRREWRRQN ASMLEEKERK ERERRDEIIA EAEQFKKSFL DKRRLNCETN RTHNRDREKL SLANQERFHK EADRQYWKAI AELVPHEIPG
201: LEKRGKRKEQ ERKPGIVVVQ GPKPGKATDL SRMRHVLVKL KEKPPAHMVP PSPPQAKEEE KKDGGKDAKK DGNKDEKKDG KQAAGPAEKK TDGSDDKAAV
301: STTAAGSPPV AAETPAEKAP EQPIKK
001: MATFDDGDFP AQTHSPSEHE DFGGYDNFSE AQQPPTQHQS GGFSSFNGDP ASPNGYGFGA SSPNHDFSSP FESSVNDANG NGGGSGGDAI FASDGPILPD
101: PNEMREEGFQ RREWRRLNTI HLEEKEKKEK EMRNQIITEA EDFKKAFYEK RDKTIETNKT DNREKEKLYW ANQEKFHKEV DKHYWKAIAE LIPREVPNIE
201: KKRGKKDPDK KPSVNVIQGP KPGKPTDLGR MRQIFLKLKT NPPPHMMPPP PPAKDAKDGK DAKDGKDAKT GKDGKDAKGG KDAKDLKDGK PADPKVTEEK
301: RPSPAKDASV ETAKPDAAAS GEGEKPVAVT EAEGTKAE
101: PNEMREEGFQ RREWRRLNTI HLEEKEKKEK EMRNQIITEA EDFKKAFYEK RDKTIETNKT DNREKEKLYW ANQEKFHKEV DKHYWKAIAE LIPREVPNIE
201: KKRGKKDPDK KPSVNVIQGP KPGKPTDLGR MRQIFLKLKT NPPPHMMPPP PPAKDAKDGK DAKDGKDAKT GKDGKDAKGG KDAKDLKDGK PADPKVTEEK
301: RPSPAKDASV ETAKPDAAAS GEGEKPVAVT EAEGTKAE
Arabidopsis Description
Clathrin light chain 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKU1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.