Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
Predictors | GFP | MS/MS | Papers | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
OQU88983 | Sorghum | nucleus | 58.74 | 62.88 |
Os07t0461500-00 | Rice | cytosol | 55.3 | 53.17 |
TraesCS2B01G073000.1 | Wheat | nucleus | 50.72 | 50.43 |
TraesCS2D01G056700.1 | Wheat | nucleus | 50.14 | 49.58 |
HORVU2Hr1G012100.2 | Barley | nucleus | 50.14 | 48.34 |
TraesCS2A01G058000.1 | Wheat | nucleus | 47.28 | 47.83 |
Zm00001d014898_P001 | Maize | plasma membrane | 36.68 | 45.07 |
Zm00001d026630_P001 | Maize | plasma membrane | 35.24 | 40.33 |
Zm00001d001814_P001 | Maize | nucleus | 34.38 | 40.13 |
Protein Annotations
EntrezGene:103632305 | MapMan:22.1.1.2 | UniProt:A0A1D6HZ76 | InterPro:Clathrin_L-chain | ncoils:Coil | GO:GO:0003674 |
GO:GO:0005198 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005794 |
GO:GO:0005886 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016192 |
GO:GO:0030130 | GO:GO:0030132 | ProteinID:ONM53385.1 | PANTHER:PTHR10639 | PANTHER:PTHR10639:SF7 | UniParc:UPI000220B8FA |
EnsemblPlantsGene:Zm00001d019596 | EnsemblPlants:Zm00001d019596_P001 | EnsemblPlants:Zm00001d019596_T001 | SEG:seg | : | : |
Description
Clathrin light chain 2
Coordinates
chr7:-:45653762..45655299
Molecular Weight (calculated)
38042.1 Da
IEP (calculated)
4.938
GRAVY (calculated)
-1.047
Length
349 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSSFDSITA VVGDDDELPP APFDTAVDGT AAEYGGEQQG FGMRRGHRFA ASYSSFGTAV SEDDLGGAGG EGGGGYGGFG IPPYSNGGPA YGYADNDANG
101: VEHVMGAQDV MDGAAHAAGD ISGGRLDEDL FSGAADDDDG AVLPPPEAMR EEGILRREWR RQNALMLEEK ERKERERRNE IIAEAEEFKR SFLDKRRLNC
201: ETNRTQNRDR EKLSLANQER FHKEADQQYY WKAIAELVPR EIPGLEKRGK RKEQERKPGI VVVQGPKPGK ATDLSRMRQV LLKLKDKPPS HMVPPPPQAK
301: EEKEKDGDKD AKKDGNKQEE KKDGKQQAAG PAEKKTDGPE MASAAGSPP
101: VEHVMGAQDV MDGAAHAAGD ISGGRLDEDL FSGAADDDDG AVLPPPEAMR EEGILRREWR RQNALMLEEK ERKERERRNE IIAEAEEFKR SFLDKRRLNC
201: ETNRTQNRDR EKLSLANQER FHKEADQQYY WKAIAELVPR EIPGLEKRGK RKEQERKPGI VVVQGPKPGK ATDLSRMRQV LLKLKDKPPS HMVPPPPQAK
301: EEKEKDGDKD AKKDGNKQEE KKDGKQQAAG PAEKKTDGPE MASAAGSPP
001: MATFDDGDFP AQTHSPSEHE DFGGYDNFSE AQQPPTQHQS GGFSSFNGDP ASPNGYGFGA SSPNHDFSSP FESSVNDANG NGGGSGGDAI FASDGPILPD
101: PNEMREEGFQ RREWRRLNTI HLEEKEKKEK EMRNQIITEA EDFKKAFYEK RDKTIETNKT DNREKEKLYW ANQEKFHKEV DKHYWKAIAE LIPREVPNIE
201: KKRGKKDPDK KPSVNVIQGP KPGKPTDLGR MRQIFLKLKT NPPPHMMPPP PPAKDAKDGK DAKDGKDAKT GKDGKDAKGG KDAKDLKDGK PADPKVTEEK
301: RPSPAKDASV ETAKPDAAAS GEGEKPVAVT EAEGTKAE
101: PNEMREEGFQ RREWRRLNTI HLEEKEKKEK EMRNQIITEA EDFKKAFYEK RDKTIETNKT DNREKEKLYW ANQEKFHKEV DKHYWKAIAE LIPREVPNIE
201: KKRGKKDPDK KPSVNVIQGP KPGKPTDLGR MRQIFLKLKT NPPPHMMPPP PPAKDAKDGK DAKDGKDAKT GKDGKDAKGG KDAKDLKDGK PADPKVTEEK
301: RPSPAKDASV ETAKPDAAAS GEGEKPVAVT EAEGTKAE
Arabidopsis Description
Clathrin light chain 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKU1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.