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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • cytosol 1
  • mitochondrion 1
  • nucleus 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
OQU88983 Sorghum nucleus 58.74 62.88
Os07t0461500-00 Rice cytosol 55.3 53.17
TraesCS2B01G073000.1 Wheat nucleus 50.72 50.43
TraesCS2D01G056700.1 Wheat nucleus 50.14 49.58
HORVU2Hr1G012100.2 Barley nucleus 50.14 48.34
TraesCS2A01G058000.1 Wheat nucleus 47.28 47.83
Zm00001d014898_P001 Maize plasma membrane 36.68 45.07
Zm00001d026630_P001 Maize plasma membrane 35.24 40.33
Zm00001d001814_P001 Maize nucleus 34.38 40.13
Protein Annotations
EntrezGene:103632305MapMan:22.1.1.2UniProt:A0A1D6HZ76InterPro:Clathrin_L-chainncoils:CoilGO:GO:0003674
GO:GO:0005198GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005794
GO:GO:0005886GO:GO:0006810GO:GO:0006886GO:GO:0008150GO:GO:0016020GO:GO:0016192
GO:GO:0030130GO:GO:0030132ProteinID:ONM53385.1PANTHER:PTHR10639PANTHER:PTHR10639:SF7UniParc:UPI000220B8FA
EnsemblPlantsGene:Zm00001d019596EnsemblPlants:Zm00001d019596_P001EnsemblPlants:Zm00001d019596_T001SEG:seg::
Description
Clathrin light chain 2
Coordinates
chr7:-:45653762..45655299
Molecular Weight (calculated)
38042.1 Da
IEP (calculated)
4.938
GRAVY (calculated)
-1.047
Length
349 amino acids
Sequence
(BLAST)
001: MSSSFDSITA VVGDDDELPP APFDTAVDGT AAEYGGEQQG FGMRRGHRFA ASYSSFGTAV SEDDLGGAGG EGGGGYGGFG IPPYSNGGPA YGYADNDANG
101: VEHVMGAQDV MDGAAHAAGD ISGGRLDEDL FSGAADDDDG AVLPPPEAMR EEGILRREWR RQNALMLEEK ERKERERRNE IIAEAEEFKR SFLDKRRLNC
201: ETNRTQNRDR EKLSLANQER FHKEADQQYY WKAIAELVPR EIPGLEKRGK RKEQERKPGI VVVQGPKPGK ATDLSRMRQV LLKLKDKPPS HMVPPPPQAK
301: EEKEKDGDKD AKKDGNKQEE KKDGKQQAAG PAEKKTDGPE MASAAGSPP
Best Arabidopsis Sequence Match ( AT2G20760.1 )
(BLAST)
001: MATFDDGDFP AQTHSPSEHE DFGGYDNFSE AQQPPTQHQS GGFSSFNGDP ASPNGYGFGA SSPNHDFSSP FESSVNDANG NGGGSGGDAI FASDGPILPD
101: PNEMREEGFQ RREWRRLNTI HLEEKEKKEK EMRNQIITEA EDFKKAFYEK RDKTIETNKT DNREKEKLYW ANQEKFHKEV DKHYWKAIAE LIPREVPNIE
201: KKRGKKDPDK KPSVNVIQGP KPGKPTDLGR MRQIFLKLKT NPPPHMMPPP PPAKDAKDGK DAKDGKDAKT GKDGKDAKGG KDAKDLKDGK PADPKVTEEK
301: RPSPAKDASV ETAKPDAAAS GEGEKPVAVT EAEGTKAE
Arabidopsis Description
Clathrin light chain 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKU1]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.