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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 3
  • vacuole 1
  • cytosol 2
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KXG33034 Sorghum cytosol 99.32 99.32
HORVU3Hr1G059290.1 Barley cytosol 97.96 97.96
TraesCS3A01G238400.1 Wheat cytosol 97.96 97.96
TraesCS3B01G266900.1 Wheat cytosol 97.96 97.96
TraesCS3D01G238700.1 Wheat cytosol 97.96 97.96
Os04t0667800-01 Rice cytosol 93.88 93.24
Os02t0261100-01 Rice cytosol 93.2 92.57
Os02t0120600-01 Rice cytosol 89.12 88.51
Os09t0293400-01 Rice cytosol 87.07 86.49
Os01t0819400-00 Rice cytosol 92.52 86.08
Zm00001d043998_P001 Maize cytosol 96.6 60.43
Os01t0673600-01 Rice extracellular, plasma membrane, plastid 49.66 47.71
Os03t0791800-01 Rice mitochondrion, nucleus 42.86 41.45
Os07t0166800-02 Rice mitochondrion, nucleus 42.86 41.45
Os05t0182500-02 Rice mitochondrion, nucleus 42.18 40.79
Os07t0577400-01 Rice nucleus 53.74 39.11
Protein Annotations
MapMan:19.2.2.5.2Gene3D:3.10.110.10EntrezGene:4327162EMBL:AB074411EMBL:AK063826EMBL:AK099284
ProteinID:BAF05677.1ProteinID:BAS73515.1ProteinID:EEE55114.1GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004842GO:GO:0005488GO:GO:0005524GO:GO:0006464GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0016567GO:GO:0016740GO:GO:0019538InterPro:IPR000608InterPro:IPR016135
EnsemblPlantsGene:Os01g0658400EnsemblPlants:Os01t0658400-01PFAM:PF00179ScanProsite:PS00183PFscan:PS50127PANTHER:PTHR24068
PANTHER:PTHR24068:SF122UniProt:Q8S920SMART:SM00212SUPFAM:SSF54495InterPro:UBQ-conjugat_E2InterPro:UBQ-conjugating_AS
InterPro:UBQ-conjugating_enzyme/RWDUniParc:UPI00000A9645RefSeq:XP_015650522.1:::
Description
UBIQUITIN CONJUGATING ENZYME 5AUbiquitin-conjugating enzyme E2 (Os01t0658400-01)
Coordinates
chr1:-:26781113..26784353
Molecular Weight (calculated)
16573.9 Da
IEP (calculated)
8.081
GRAVY (calculated)
-0.410
Length
147 amino acids
Sequence
(BLAST)
001: MASKRIQKEL KDLQKDPPTS CSAGPVGEDM FHWQATIMGP SDSPYAGGVF LVTIHFPPDY PFKPPKVAFR TKVFHPNINS NGSICLDILK DQWSPALTIS
101: KVLLSICSLL TDPNPDDPLV PEIAHMYKTD RHKYENTART WTQRYAM
Best Arabidopsis Sequence Match ( AT4G27960.1 )
(BLAST)
001: MASKRILKEL KDLQKDPPTS CSAGPVAEDM FHWQATIMGP SDSPYSGGVF LVTIHFPPDY PFKPPKVAFR TKVFHPNINS NGSICLDILK EQWSPALTIS
101: KVLLSICSLL TDPNPDDPLV PEIAHMYKTD KNKYESTART WTQKYAMG
Arabidopsis Description
UBC9Ubiquitin conjugating enzyme 9 [Source:UniProtKB/TrEMBL;Acc:F4JKF3]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.