Factsheet for Os02t0261100-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
vacuole 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g011740.2.1	Tomato	cytosol	96.62	96.62
HORVU7Hr1G080800.2	Barley	cytosol, nucleus, peroxisome	95.95	95.95
TraesCS7D01G335800.1	Wheat	cytosol, nucleus, peroxisome	95.95	95.95
TraesCS7B01G239300.1	Wheat	cytosol, nucleus, peroxisome	95.95	95.95
TraesCS7A01G343800.1	Wheat	cytosol, nucleus, peroxisome	95.95	95.95
Os04t0667800-01	Rice	cytosol	95.27	95.27
Solyc01g095490.2.1	Tomato	cytosol	95.27	95.27
PGSC0003DMT400049914	Potato	cytosol	95.27	95.27
PGSC0003DMT400000272	Potato	cytosol	95.27	95.27
Os01t0658400-01	Rice	cytosol	92.57	93.2
Os02t0120600-01	Rice	cytosol	89.19	89.19
Os01t0819400-00	Rice	cytosol	93.92	87.97
Os09t0293400-01	Rice	cytosol	85.81	85.81
Os01t0673600-01	Rice	extracellular, plasma membrane, plastid	47.97	46.41
Os07t0166800-02	Rice	mitochondrion, nucleus	41.89	40.79
Os03t0791800-01	Rice	mitochondrion, nucleus	41.89	40.79
Os05t0182500-02	Rice	mitochondrion, nucleus	41.22	40.13
Os07t0577400-01	Rice	nucleus	51.35	37.62

Protein Annotations

MapMan:19.2.2.5.2	Gene3D:3.10.110.10	EntrezGene:4328940	EMBL:AB074412	EMBL:AK121248	ProteinID:BAD20047.1
ProteinID:BAF08400.1	ProteinID:BAS77989.1	ProteinID:EAZ22486.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004842	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0006464	GO:GO:0006511	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987
GO:GO:0016020	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000608	InterPro:IPR016135
EnsemblPlantsGene:Os02g0261100	EnsemblPlants:Os02t0261100-01	PFAM:PF00179	ScanProsite:PS00183	PFscan:PS50127	PANTHER:PTHR24068
PANTHER:PTHR24068:SF68	UniProt:Q8S919	SMART:SM00212	SUPFAM:SSF54495	InterPro:UBQ-conjugat_E2	InterPro:UBQ-conjugating_AS
InterPro:UBQ-conjugating_enzyme/RWD	UniParc:UPI00000A0F82	RefSeq:XP_015627363.1	:	:	:

Description

UBIQUITIN CONJUGATING ENZYME 5BUbiquitin-conjugating enzyme E2, Elicitor-induced defense response (Os02t0261100-01)

Coordinates

chr2:+:9116165..9119456

Molecular Weight (calculated)

16446.9 Da

IEP (calculated)

8.068

GRAVY (calculated)

-0.284

Length

148 amino acids

Sequence
(BLAST)

001: MASKRILKEL KDLQKDPPTS CSAGPVAEDM FHWQATLMGP SDSPYAGGVF LVTIHFPPDY PFKPPKVALK TKVFHPNINS NGSICLDILK EQWSPALTIS
101: KVLLSICSLL TDPNPDDPLV PEIAHMYKTD RAKYESTARS WTQKYAMG

Best Arabidopsis Sequence Match ( AT1G64230.1 )
(BLAST)

001: MASKRILKEL KDLQKDPPTS CSAGPVAEDM FHWQATIMGP SDSPYSGGVF LVTIHFPPDY PFKPPKVAFR TKVFHPNVNS NGSICLDILK EQWSPALTIS
101: KVLLSICSLL TDPNPDDPLV PEIAHMYKTD RAKYESTARS WTQKYAMG

Arabidopsis Description

UBC28Ubiquitin-conjugating enzyme 28 [Source:UniProtKB/TrEMBL;Acc:F4I5B8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.