Factsheet for Os05t0182500-02

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G140300.1	Wheat	mitochondrion	99.34	99.34
EER98036	Sorghum	mitochondrion, nucleus	98.68	98.68
KRH45858	Soybean	mitochondrion, nucleus	98.68	98.68
TraesCS1D01G121800.1	Wheat	mitochondrion, nucleus	98.68	98.68
Os07t0166800-02	Rice	mitochondrion, nucleus	98.68	98.68
Os03t0791800-01	Rice	mitochondrion, nucleus	98.03	98.03
GSMUA_Achr6P04830_001	Banana	cytosol, nucleus, plastid	91.45	97.2
TraesCS2A01G247700.1	Wheat	nucleus	96.71	96.71
Solyc03g113100.2.1	Tomato	mitochondrion, nucleus	96.71	96.71
CDY11654	Canola	mitochondrion	96.05	96.05
CDY38761	Canola	mitochondrion	96.05	96.05
Bra016264.1-P	Field mustard	mitochondrion	96.05	96.05
PGSC0003DMT400046771	Potato	mitochondrion, nucleus	96.05	96.05
HORVU1Hr1G027600.1	Barley	plastid	99.34	63.98
Os01t0658400-01	Rice	cytosol	40.79	42.18
VIT_14s0108g00140.t01	Wine grape	cytosol, plastid	59.87	41.94
Os04t0667800-01	Rice	cytosol	40.79	41.89
Os02t0261100-01	Rice	cytosol	40.13	41.22
Os02t0120600-01	Rice	cytosol	39.47	40.54
Os01t0819400-00	Rice	cytosol	41.45	39.87
Os09t0293400-01	Rice	cytosol	38.82	39.86
Os01t0673600-01	Rice	extracellular, plasma membrane, plastid	37.5	37.25
Os07t0577400-01	Rice	nucleus	28.29	21.29

Protein Annotations

MapMan:19.2.2.1.4	Gene3D:3.10.110.10	EntrezGene:4337993	EMBL:AK112003	ProteinID:BAF16733.1	ProteinID:BAS92575.1
ProteinID:EEE62563.1	GO:GO:0000166	GO:GO:0000209	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006139	GO:GO:0006259	GO:GO:0006281	GO:GO:0006464	GO:GO:0006950	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016043	GO:GO:0016574	GO:GO:0016740
GO:GO:0019538	GO:GO:0031625	GO:GO:0043161	GO:GO:0061630	InterPro:IPR000608	InterPro:IPR016135
EnsemblPlantsGene:Os05g0182500	EnsemblPlants:Os05t0182500-02	PFAM:PF00179	ScanProsite:PS00183	PFscan:PS50127	PANTHER:PTHR43898
PANTHER:PTHR43898:SF8	UniProt:Q0DK90	SMART:SM00212	SUPFAM:SSF54495	InterPro:UBQ-conjugat_E2	InterPro:UBQ-conjugating_AS
InterPro:UBQ-conjugating_enzyme/RWD	UniParc:UPI0000E12381	RefSeq:XP_015640111.1	:	:	:

Description

UBIQUITIN-CONJUGATING ENZYME 8Similar to Ubiquitin carrier protein. (Os05t0182500-01);Rad6 (Ubiquitin carrier protein). (Os05t0182500-02)

Coordinates

chr5:+:4958343..4964946

Molecular Weight (calculated)

17306.5 Da

IEP (calculated)

5.196

GRAVY (calculated)

-0.524

Length

152 amino acids

Sequence
(BLAST)

001: MSTPARKRLM RDFKRLMQDP PAGISGAPQD NNIMLWNAVI FGPDDTPWDG GTFKLTLQFT EDYPNKPPTV RFVSRMFHPN IYADGSICLD ILQNQWSPIY
101: DVAAILTSIQ SLLCDPNPNS PANSEAARLF SENKREYNRK VREIVEQSWT AD

Best Arabidopsis Sequence Match ( AT2G02760.3 )
(BLAST)

001: MSTPARKRLM RDFKRLQQDP PAGISGAPQD NNIMLWNAVI FGPDDTPWDG GTFKLSLQFS EDYPNKPPTV RFVSRMFHPN IYADGSICLD ILQNQWSPIY
101: DVAAILTSIQ SLLCDPNPNS PANSEAARMF SESKREYNRR VREVVEQSWT AD

Arabidopsis Description

UBC2UBC2 [Source:UniProtKB/TrEMBL;Acc:A0A178W0U6]
SUBAcon: [mitochondrion,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.