Factsheet for Os07t0166800-02

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0791800-01	Rice	mitochondrion, nucleus	99.34	99.34
KRH45858	Soybean	mitochondrion, nucleus	98.68	98.68
Os05t0182500-02	Rice	mitochondrion, nucleus	98.68	98.68
GSMUA_Achr6P04830_001	Banana	cytosol, nucleus, plastid	92.76	98.6
TraesCS2A01G247700.1	Wheat	nucleus	98.03	98.03
Solyc03g113100.2.1	Tomato	mitochondrion, nucleus	96.71	96.71
PGSC0003DMT400046771	Potato	mitochondrion, nucleus	96.71	96.71
CDY11654	Canola	mitochondrion	96.05	96.05
CDY38761	Canola	mitochondrion	96.05	96.05
Bra016264.1-P	Field mustard	mitochondrion	96.05	96.05
VIT_14s0108g00140.t01	Wine grape	cytosol, plastid	61.18	42.86
Os01t0658400-01	Rice	cytosol	41.45	42.86
Os04t0667800-01	Rice	cytosol	41.45	42.57
Os02t0261100-01	Rice	cytosol	40.79	41.89
Os02t0120600-01	Rice	cytosol	40.13	41.22
Os01t0819400-00	Rice	cytosol	42.11	40.51
Os09t0293400-01	Rice	cytosol	38.82	39.86
Os01t0673600-01	Rice	extracellular, plasma membrane, plastid	37.5	37.25
Os07t0577400-01	Rice	nucleus	28.29	21.29

Protein Annotations

MapMan:19.2.2.1.4	Gene3D:3.10.110.10	EntrezGene:4342488	EMBL:AK070524	EMBL:AK121382	ProteinID:BAC79758.1
ProteinID:BAD30372.1	ProteinID:BAF20887.1	ProteinID:BAT00210.1	ProteinID:EEE66628.1	GO:GO:0000166	GO:GO:0000209
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0006259	GO:GO:0006281
GO:GO:0006464	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987
GO:GO:0016043	GO:GO:0016574	GO:GO:0016740	GO:GO:0019538	GO:GO:0031625	GO:GO:0043161
GO:GO:0061630	InterPro:IPR000608	InterPro:IPR016135	EnsemblPlantsGene:Os07g0166800	EnsemblPlants:Os07t0166800-02	PFAM:PF00179
ScanProsite:PS00183	PFscan:PS50127	PANTHER:PTHR43898	PANTHER:PTHR43898:SF2	UniProt:Q7XIC8	SMART:SM00212
SUPFAM:SSF54495	InterPro:UBQ-conjugat_E2	InterPro:UBQ-conjugating_AS	InterPro:UBQ-conjugating_enzyme/RWD	UniParc:UPI00001B3A0C	RefSeq:XP_015646642.1

Description

UBIQUITIN-CONJUGATING ENZYME 7Rad6 (Ubiquitin carrier protein). (Os07t0166800-01);Rad6 (Ubiquitin carrier protein). (Os07t0166800-02)

Coordinates

chr7:-:3586107..3593838

Molecular Weight (calculated)

17312.4 Da

IEP (calculated)

5.749

GRAVY (calculated)

-0.558

Length

152 amino acids

Sequence
(BLAST)

001: MSTPARKRLM RDFKRLQQDP PAGISGAPHD NNIMLWNAVI FGPDDTPWDG GTFKLTLQFT EDYPNKPPTV RFVSRMFHPN IYADGSICLD ILQNQWSPIY
101: DVAAILTSIQ SLLCDPNPNS PANSEAARLF SENKREYNRK VREIVEQSWT AD

Best Arabidopsis Sequence Match ( AT2G02760.3 )
(BLAST)

001: MSTPARKRLM RDFKRLQQDP PAGISGAPQD NNIMLWNAVI FGPDDTPWDG GTFKLSLQFS EDYPNKPPTV RFVSRMFHPN IYADGSICLD ILQNQWSPIY
101: DVAAILTSIQ SLLCDPNPNS PANSEAARMF SESKREYNRR VREVVEQSWT AD

Arabidopsis Description

UBC2UBC2 [Source:UniProtKB/TrEMBL;Acc:A0A178W0U6]
SUBAcon: [mitochondrion,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.