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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:
  • nucleus 3
  • cytosol 3
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, nucleus, plastid
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
EpiLoc:cytosol
MultiLoc:cytosol
Plant-mPloc:cytosol, nucleus
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr6P00800_001 Banana nucleus 97.2 97.2
GSMUA_Achr2P17510_001 Banana nucleus 97.9 96.55
EER98036 Sorghum mitochondrion, nucleus 98.6 92.76
Os07t0166800-02 Rice mitochondrion, nucleus 98.6 92.76
Os03t0791800-01 Rice mitochondrion, nucleus 98.6 92.76
Os05t0182500-02 Rice mitochondrion, nucleus 97.2 91.45
KRH45858 Soybean mitochondrion, nucleus 97.2 91.45
TraesCS1B01G140300.1 Wheat mitochondrion 96.5 90.79
TraesCS1D01G121800.1 Wheat mitochondrion, nucleus 95.8 90.13
GSMUA_Achr9P25840_001 Banana mitochondrion, nucleus 95.1 89.47
CDY11654 Canola mitochondrion 94.41 88.82
Bra016264.1-P Field mustard mitochondrion 94.41 88.82
CDY38761 Canola mitochondrion 94.41 88.82
Zm00001d034404_P001 Maize mitochondrion 95.8 84.57
GSMUA_Achr2P16860_001 Banana endoplasmic reticulum, golgi 97.2 71.65
HORVU1Hr1G027600.1 Barley plastid 96.5 58.47
GSMUA_Achr9P28860_001 Banana cytosol 34.97 45.05
GSMUA_Achr9P27870_001 Banana cytosol 34.27 44.14
GSMUA_Achr3P15810_001 Banana cytosol 44.06 42.57
GSMUA_Achr7P24690_001 Banana cytosol 43.36 41.89
GSMUA_Achr10P... Banana cytosol 43.36 41.89
GSMUA_Achr9P12710_001 Banana cytosol 43.36 41.89
GSMUA_Achr9P05290_001 Banana cytosol 43.36 41.89
GSMUA_Achr8P27940_001 Banana cytosol 43.36 41.89
GSMUA_Achr6P36250_001 Banana nucleus 43.36 41.89
GSMUA_Achr4P02490_001 Banana cytosol 43.36 41.89
GSMUA_Achr4P15590_001 Banana cytosol 43.36 41.89
GSMUA_Achr3P26650_001 Banana cytosol, mitochondrion, peroxisome 42.66 41.22
GSMUA_Achr7P17820_001 Banana cytosol 42.66 41.22
GSMUA_Achr4P19400_001 Banana cytosol 42.66 41.22
GSMUA_Achr6P05720_001 Banana cytosol 41.96 40.54
GSMUA_Achr1P16460_001 Banana cytosol, nucleus, vacuole 25.17 40.0
GSMUA_Achr9P12740_001 Banana cytosol, nucleus, peroxisome 41.26 39.86
VIT_14s0108g00140.t01 Wine grape cytosol, plastid 58.04 38.25
GSMUA_Achr1P27440_001 Banana cytosol 39.86 37.25
GSMUA_Achr1P04790_001 Banana cytosol 39.16 36.6
GSMUA_Achr4P10380_001 Banana cytosol 43.36 36.26
GSMUA_Achr3P11950_001 Banana cytosol 32.17 36.22
GSMUA_Achr4P08430_001 Banana mitochondrion 43.36 34.83
GSMUA_Achr4P31050_001 Banana cytosol 18.18 34.21
GSMUA_Achr6P26870_001 Banana cytosol 36.36 33.99
GSMUA_Achr4P22180_001 Banana cytosol 32.17 33.09
GSMUA_Achr9P06450_001 Banana cytosol 39.16 32.37
GSMUA_Achr5P22400_001 Banana cytosol, nucleus, peroxisome 43.36 29.52
GSMUA_Achr4P31060_001 Banana cytosol, extracellular 16.78 29.27
GSMUA_Achr6P32020_001 Banana mitochondrion, plastid 43.36 25.83
GSMUA_Achr5P04210_001 Banana cytosol 26.57 22.49
Protein Annotations
MapMan:19.2.2.1.4Gene3D:3.10.110.10GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0005524GO:GO:0016740EnsemblPlantsGene:GSMUA_Achr6G04830_001EnsemblPlants:GSMUA_Achr6P04830_001EnsemblPlants:GSMUA_Achr6T04830_001InterPro:IPR000608
InterPro:IPR016135UniProt:M0T481PFAM:PF00179ScanProsite:PS00183PFscan:PS50127PANTHER:PTHR43898
PANTHER:PTHR43898:SF2SMART:SM00212SUPFAM:SSF54495InterPro:UBQ-conjugat_E2InterPro:UBQ-conjugating_ASInterPro:UBQ-conjugating_enzyme/RWD
UniParc:UPI00029653F8:::::
Description
Ubiquitin-conjugating enzyme E2 2 [Source:GMGC_GENE;Acc:GSMUA_Achr6G04830_001]
Coordinates
chr6:+:3277334..3283678
Molecular Weight (calculated)
16271.1 Da
IEP (calculated)
4.692
GRAVY (calculated)
-0.534
Length
143 amino acids
Sequence
(BLAST)
001: MRDFKRLQQD PPAGISGAPH ENNIMLWNAV IFGPDDTPWD GGTFKLTLQF TEDYPNKPPS VRFVSRMFHP NIYADGSICL DILQNQWSPI YDVAAILTSI
101: QSLLCDPNPN SPANSEAARL FSENKREYNR KVREIVEQSW TAD
Best Arabidopsis Sequence Match ( AT2G02760.3 )
(BLAST)
001: MSTPARKRLM RDFKRLQQDP PAGISGAPQD NNIMLWNAVI FGPDDTPWDG GTFKLSLQFS EDYPNKPPTV RFVSRMFHPN IYADGSICLD ILQNQWSPIY
101: DVAAILTSIQ SLLCDPNPNS PANSEAARMF SESKREYNRR VREVVEQSWT AD
Arabidopsis Description
UBC2UBC2 [Source:UniProtKB/TrEMBL;Acc:A0A178W0U6]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.