Subcellular Localization
min:
: max
Winner_takes_all: extracellular, cytosol
Predictor Summary:
Predictor Summary:
- extracellular 4
- golgi 3
- plasma membrane 3
- endoplasmic reticulum 3
- vacuole 3
- cytosol 4
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr1P04790_001 | Banana | cytosol | 81.71 | 43.79 |
| GSMUA_Achr1P27440_001 | Banana | cytosol | 81.71 | 43.79 |
| GSMUA_Achr6P26870_001 | Banana | cytosol | 76.83 | 41.18 |
| GSMUA_Achr9P06450_001 | Banana | cytosol | 82.93 | 39.31 |
| GSMUA_Achr9P27870_001 | Banana | cytosol | 50.0 | 36.94 |
| VIT_12s0028g02220.t01 | Wine grape | extracellular | 81.71 | 36.41 |
| GSMUA_Achr9P28860_001 | Banana | cytosol | 47.56 | 35.14 |
| GSMUA_Achr1P16460_001 | Banana | cytosol, nucleus, vacuole | 31.71 | 28.89 |
| GSMUA_Achr3P15810_001 | Banana | cytosol | 50.0 | 27.7 |
| GSMUA_Achr9P05290_001 | Banana | cytosol | 50.0 | 27.7 |
| GSMUA_Achr4P15590_001 | Banana | cytosol | 50.0 | 27.7 |
| GSMUA_Achr8P27940_001 | Banana | cytosol | 50.0 | 27.7 |
| GSMUA_Achr6P05720_001 | Banana | cytosol | 48.78 | 27.03 |
| GSMUA_Achr9P12740_001 | Banana | cytosol, nucleus, peroxisome | 48.78 | 27.03 |
| GSMUA_Achr7P24690_001 | Banana | cytosol | 48.78 | 27.03 |
| GSMUA_Achr6P36250_001 | Banana | nucleus | 48.78 | 27.03 |
| GSMUA_Achr3P26650_001 | Banana | cytosol, mitochondrion, peroxisome | 48.78 | 27.03 |
| GSMUA_Achr4P19400_001 | Banana | cytosol | 48.78 | 27.03 |
| GSMUA_Achr10P... | Banana | cytosol | 47.56 | 26.35 |
| GSMUA_Achr9P12710_001 | Banana | cytosol | 47.56 | 26.35 |
| GSMUA_Achr7P17820_001 | Banana | cytosol | 47.56 | 26.35 |
| GSMUA_Achr4P02490_001 | Banana | cytosol | 46.34 | 25.68 |
| GSMUA_Achr4P10380_001 | Banana | cytosol | 50.0 | 23.98 |
| GSMUA_Achr4P08430_001 | Banana | mitochondrion | 50.0 | 23.03 |
| GSMUA_Achr4P22180_001 | Banana | cytosol | 35.37 | 20.86 |
| GSMUA_Achr3P11950_001 | Banana | cytosol | 31.71 | 20.47 |
| GSMUA_Achr5P22400_001 | Banana | cytosol, nucleus, peroxisome | 48.78 | 19.05 |
| GSMUA_Achr6P00800_001 | Banana | nucleus | 30.49 | 17.48 |
| GSMUA_Achr2P17510_001 | Banana | nucleus | 30.49 | 17.24 |
| GSMUA_Achr6P32020_001 | Banana | mitochondrion, plastid | 50.0 | 17.08 |
| GSMUA_Achr6P04830_001 | Banana | cytosol, nucleus, plastid | 29.27 | 16.78 |
| GSMUA_Achr9P25840_001 | Banana | mitochondrion, nucleus | 29.27 | 15.79 |
| GSMUA_Achr2P16860_001 | Banana | endoplasmic reticulum, golgi | 29.27 | 12.37 |
| GSMUA_Achr5P04210_001 | Banana | cytosol | 9.76 | 4.73 |
| GSMUA_Achr4P31050_001 | Banana | cytosol | 1.22 | 1.32 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr4P31060_001 | EnsemblPlants:GSMUA_Achr4T31060_001 | EnsemblPlantsGene:GSMUA_Achr4G31060_001 | Gene3D:3.10.110.10 | InterPro:IPR000608 | InterPro:IPR016135 |
| InterPro:UBQ-conjugat_E2 | InterPro:UBQ-conjugating_enzyme/RWD | PANTHER:PTHR43902 | PANTHER:PTHR43902:SF5 | PFAM:PF00179 | PFscan:PS50127 |
| SEG:seg | SMART:SM00212 | SUPFAM:SSF54495 | UniParc:UPI00029507C7 | UniProt:M0STL8 | MapMan:35.1 |
Description
Ubiquitin-conjugating enzyme E2 36 [Source:GMGC_GENE;Acc:GSMUA_Achr4G31060_001]
Coordinates
chr4:+:28377344..28381053
Molecular Weight (calculated)
9230.2 Da
IEP (calculated)
4.987
GRAVY (calculated)
-0.033
Length
82 amino acids
Sequence
(BLAST)
(BLAST)
1: MSLLFNLINL ENLLGRICLD ILKDKWSPAL QIRTVLLSIQ ALLSAPNPDD PLSENIAKHW KTNEAEAVET AREWTRLYAT GA
001: MRYFNVMILG PTQSPYEGGV FKLELFLPEE YPMAAPKVRF LTKIYHPNID KLGRICLDIL KDKWSPALQI RTVLLSIQAL LSAPNPDDPL SENIAKHWKS
101: NEAEAVETAK EWTRLYASGA
101: NEAEAVETAK EWTRLYASGA
Arabidopsis Description
UBC36Ubiquitin-conjugating enzyme 36 [Source:UniProtKB/TrEMBL;Acc:F4I615]
SUBAcon: [cytosol,vacuole,plastid]
SUBAcon: [cytosol,vacuole,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.