Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- vacuole 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH64511 | Soybean | cytosol | 98.65 | 98.65 |
| KRH53428 | Soybean | cytosol | 98.65 | 98.65 |
| KRH18135 | Soybean | cytosol | 98.65 | 97.99 |
| Solyc03g007470.2.1 | Tomato | cytosol | 97.97 | 97.97 |
| PGSC0003DMT400023419 | Potato | cytosol | 97.97 | 97.97 |
| KRH15985 | Soybean | cytosol | 97.97 | 97.97 |
| GSMUA_Achr7P24690_001 | Banana | cytosol | 97.97 | 97.97 |
| GSMUA_Achr4P15590_001 | Banana | cytosol | 97.3 | 97.3 |
| GSMUA_Achr4P02490_001 | Banana | cytosol | 97.3 | 97.3 |
| GSMUA_Achr6P05720_001 | Banana | cytosol | 95.95 | 95.95 |
| CDY25571 | Canola | cytosol | 94.59 | 94.59 |
| CDY34409 | Canola | cytosol | 94.59 | 94.59 |
| GSMUA_Achr9P28860_001 | Banana | cytosol | 70.95 | 94.59 |
| GSMUA_Achr9P05290_001 | Banana | cytosol | 94.59 | 94.59 |
| GSMUA_Achr8P27940_001 | Banana | cytosol | 94.59 | 94.59 |
| AT5G41700.4 | Thale cress | cytosol, mitochondrion, peroxisome | 94.59 | 93.96 |
| GSMUA_Achr3P15810_001 | Banana | cytosol | 93.24 | 93.24 |
| GSMUA_Achr4P19400_001 | Banana | cytosol | 91.22 | 91.22 |
| GSMUA_Achr9P12740_001 | Banana | cytosol, nucleus, peroxisome | 91.22 | 91.22 |
| GSMUA_Achr6P36250_001 | Banana | nucleus | 91.22 | 91.22 |
| GSMUA_Achr3P26650_001 | Banana | cytosol, mitochondrion, peroxisome | 88.51 | 88.51 |
| GSMUA_Achr9P27870_001 | Banana | cytosol | 64.86 | 86.49 |
| GSMUA_Achr7P17820_001 | Banana | cytosol | 85.81 | 85.81 |
| GSMUA_Achr4P10380_001 | Banana | cytosol | 98.65 | 85.38 |
| GSMUA_Achr9P12710_001 | Banana | cytosol | 84.46 | 84.46 |
| GSMUA_Achr1P16460_001 | Banana | cytosol, nucleus, vacuole | 51.35 | 84.44 |
| GSMUA_Achr3P11950_001 | Banana | cytosol | 72.3 | 84.25 |
| Bra027749.1-P | Field mustard | nucleus | 85.14 | 82.89 |
| GSMUA_Achr4P08430_001 | Banana | mitochondrion | 98.65 | 82.02 |
| CDY08368 | Canola | cytosol | 83.78 | 77.99 |
| AT1G64230.5 | Thale cress | cytosol | 93.92 | 73.16 |
| CDY38184 | Canola | cytosol | 85.14 | 70.0 |
| GSMUA_Achr5P22400_001 | Banana | cytosol, nucleus, peroxisome | 90.54 | 63.81 |
| GSMUA_Achr6P32020_001 | Banana | mitochondrion, plastid | 95.27 | 58.75 |
| GSMUA_Achr4P22180_001 | Banana | cytosol | 46.62 | 49.64 |
| GSMUA_Achr4P31060_001 | Banana | cytosol, extracellular | 26.35 | 47.56 |
| GSMUA_Achr1P04790_001 | Banana | cytosol | 47.97 | 46.41 |
| GSMUA_Achr1P27440_001 | Banana | cytosol | 47.97 | 46.41 |
| GSMUA_Achr6P26870_001 | Banana | cytosol | 46.62 | 45.1 |
| GSMUA_Achr6P00800_001 | Banana | nucleus | 43.24 | 44.76 |
| GSMUA_Achr6P04830_001 | Banana | cytosol, nucleus, plastid | 41.89 | 43.36 |
| GSMUA_Achr9P25840_001 | Banana | mitochondrion, nucleus | 43.92 | 42.76 |
| GSMUA_Achr2P17510_001 | Banana | nucleus | 41.89 | 42.76 |
| GSMUA_Achr5P04210_001 | Banana | cytosol | 47.97 | 42.01 |
| GSMUA_Achr9P06450_001 | Banana | cytosol | 47.97 | 41.04 |
| GSMUA_Achr4P31050_001 | Banana | cytosol | 18.92 | 36.84 |
| GSMUA_Achr2P16860_001 | Banana | endoplasmic reticulum, golgi | 43.92 | 33.51 |
Protein Annotations
| MapMan:19.2.2.5.2 | Gene3D:3.10.110.10 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0016740 | EnsemblPlantsGene:GSMUA_Achr10G01120_001 | EnsemblPlants:GSMUA_Achr10P01120_001 | EnsemblPlants:GSMUA_Achr10T01120_001 | InterPro:IPR000608 |
| InterPro:IPR016135 | UniProt:M0RED9 | PFAM:PF00179 | ScanProsite:PS00183 | PFscan:PS50127 | PANTHER:PTHR24068 |
| PANTHER:PTHR24068:SF68 | SMART:SM00212 | SUPFAM:SSF54495 | InterPro:UBQ-conjugat_E2 | InterPro:UBQ-conjugating_AS | InterPro:UBQ-conjugating_enzyme/RWD |
| UniParc:UPI00029672F6 | : | : | : | : | : |
Description
Ubiquitin-conjugating enzyme E2 10 [Source:GMGC_GENE;Acc:GSMUA_Achr10G01120_001]
Coordinates
chr10:-:1955583..1959307
Molecular Weight (calculated)
16531.9 Da
IEP (calculated)
8.069
GRAVY (calculated)
-0.314
Length
148 amino acids
Sequence
(BLAST)
(BLAST)
001: MASKRILKEL KDLQKDPPTS CSAGPVAEDM FHWQATIMGP PDSPYAGGVF LVTIHFPPDY PFKPPKVAFR TKVFHPNINS NGSICLDILK EQWSPALTIS
101: KVLLSICSLL TDPNPDDPLV PEIAHMYKTD RNKYEASARS WTQKYAMG
101: KVLLSICSLL TDPNPDDPLV PEIAHMYKTD RNKYEASARS WTQKYAMG
001: MASKRILKEL KDLQKDPPTS CSAGPVAEDM FHWQATIMGP SESPYAGGVF LVTIHFPPDY PFKPPKVAFR TKVFHPNINS NGSICLDILK EQWSPALTIS
101: KVLLSICSLL TDPNPDDPLV PEIAHMYKTD KNKYESTARS WTQKYAMG
101: KVLLSICSLL TDPNPDDPLV PEIAHMYKTD KNKYESTARS WTQKYAMG
Arabidopsis Description
UBC10Ubiquitin-conjugating enzyme E2 10 [Source:UniProtKB/Swiss-Prot;Acc:P35133]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.