Factsheet for GSMUA_Achr4P31050_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 4
plastid 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra035071.1-P	Field mustard	cytosol	89.47	48.92
Os01t0673600-01	Rice	extracellular, plasma membrane, plastid	93.42	46.41
EES03421	Sorghum	cytosol	93.42	46.41
TraesCS3D01G271400.1	Wheat	cytosol	93.42	46.41
TraesCS3B01G305500.1	Wheat	mitochondrion	93.42	46.41
TraesCS3A01G271800.1	Wheat	cytosol	93.42	46.41
TraesCS1D01G400600.1	Wheat	cytosol	92.11	45.75
KRH55097	Soybean	endoplasmic reticulum	92.11	45.75
CDY54372	Canola	cytosol	92.11	45.75
CDY40025	Canola	cytosol	92.11	45.75
CDY35126	Canola	cytosol	92.11	45.75
KRH26227	Soybean	cytosol	92.11	45.75
TraesCS1A01G392400.1	Wheat	cytosol	92.11	45.75
CDX83936	Canola	cytosol	92.11	45.75
CDX81788	Canola	cytosol	92.11	45.75
Solyc10g007260.2.1	Tomato	plastid	92.11	45.75
Bra026700.1-P	Field mustard	cytosol	92.11	45.75
Bra026018.1-P	Field mustard	cytosol	92.11	45.75
PGSC0003DMT400054795	Potato	cytosol	92.11	45.75
PGSC0003DMT400032251	Potato	cytosol	92.11	45.75
AT1G78870.2	Thale cress	cytosol	90.79	45.1
Solyc07g062570.2.1	Tomato	plastid	90.79	45.1
KXG35379	Sorghum	cytosol	90.79	45.1
GSMUA_Achr1P04790_001	Banana	cytosol	90.79	45.1
CDX87428	Canola	cytosol	90.79	45.1
KRH21984	Soybean	endoplasmic reticulum, nucleus	90.79	45.1
Bra016626.1-P	Field mustard	cytosol	90.79	45.1
Bra008383.1-P	Field mustard	cytosol	90.79	45.1
CDY14587	Canola	cytosol	90.79	44.81
GSMUA_Achr1P27440_001	Banana	cytosol	89.47	44.44
TraesCS5D01G186100.1	Wheat	cytosol	89.47	44.44
TraesCS5B01G179700.1	Wheat	cytosol	89.47	44.44
TraesCS5A01G181700.1	Wheat	cytosol	89.47	44.44
CDX96802	Canola	cytosol	89.47	44.44
CDX88485	Canola	cytosol	89.47	44.44
KRH27335	Soybean	endoplasmic reticulum	88.16	44.37
Zm00001d009552_P002	Maize	cytosol	92.11	44.03
HORVU5Hr1G055360.2	Barley	cytosol, mitochondrion	89.47	43.87
Zm00001d038995_P001	Maize	cytosol	93.42	43.56
VIT_19s0014g01460.t01	Wine grape	cytosol	88.16	43.23
CDY26882	Canola	cytosol	81.58	42.76
AT1G16890.3	Thale cress	cytosol	90.79	42.59
CDY57941	Canola	cytosol	86.84	42.58
Zm00001d043905_P003	Maize	cytosol	93.42	42.01
HORVU1Hr1G086610.1	Barley	cytosol, plastid	92.11	40.23
GSMUA_Achr9P06450_001	Banana	cytosol	90.79	39.88
GSMUA_Achr6P26870_001	Banana	cytosol	80.26	39.87
CDX79272	Canola	cytosol	86.84	38.82
Zm00001d011565_P002	Maize	cytosol, mitochondrion	92.11	35.18
HORVU3Hr1G061790.1	Barley	cytosol	93.42	34.98
HORVU1Hr1G086480.1	Barley	mitochondrion	88.16	34.9
TraesCS1B01G420600.1	Wheat	vacuole	68.42	25.37
GSMUA_Achr3P11950_001	Banana	cytosol	36.84	22.05
GSMUA_Achr3P15810_001	Banana	cytosol	38.16	19.59
GSMUA_Achr9P12740_001	Banana	cytosol, nucleus, peroxisome	38.16	19.59
GSMUA_Achr9P05290_001	Banana	cytosol	38.16	19.59
GSMUA_Achr8P27940_001	Banana	cytosol	38.16	19.59
GSMUA_Achr3P26650_001	Banana	cytosol, mitochondrion, peroxisome	36.84	18.92
GSMUA_Achr7P24690_001	Banana	cytosol	36.84	18.92
GSMUA_Achr10P...	Banana	cytosol	36.84	18.92
GSMUA_Achr4P02490_001	Banana	cytosol	36.84	18.92
GSMUA_Achr4P15590_001	Banana	cytosol	36.84	18.92
GSMUA_Achr9P12710_001	Banana	cytosol	36.84	18.92
GSMUA_Achr7P17820_001	Banana	cytosol	35.53	18.24
GSMUA_Achr4P19400_001	Banana	cytosol	35.53	18.24
GSMUA_Achr6P05720_001	Banana	cytosol	35.53	18.24
GSMUA_Achr6P36250_001	Banana	nucleus	35.53	18.24
GSMUA_Achr6P04830_001	Banana	cytosol, nucleus, plastid	34.21	18.18
GSMUA_Achr2P17510_001	Banana	nucleus	34.21	17.93
GSMUA_Achr1P16460_001	Banana	cytosol, nucleus, vacuole	21.05	17.78
GSMUA_Achr6P00800_001	Banana	nucleus	32.89	17.48
GSMUA_Achr9P25840_001	Banana	mitochondrion, nucleus	34.21	17.11
GSMUA_Achr4P22180_001	Banana	cytosol	30.26	16.55
GSMUA_Achr4P10380_001	Banana	cytosol	36.84	16.37
GSMUA_Achr5P04210_001	Banana	cytosol	35.53	15.98
GSMUA_Achr4P08430_001	Banana	mitochondrion	36.84	15.73
GSMUA_Achr2P16860_001	Banana	endoplasmic reticulum, golgi	36.84	14.43
GSMUA_Achr9P28860_001	Banana	cytosol	21.05	14.41
GSMUA_Achr9P27870_001	Banana	cytosol	21.05	14.41
GSMUA_Achr6P32020_001	Banana	mitochondrion, plastid	39.47	12.5
GSMUA_Achr5P22400_001	Banana	cytosol, nucleus, peroxisome	34.21	12.38
HORVU1Hr1G086460.1	Barley	endoplasmic reticulum, extracellular	6.58	5.26
GSMUA_Achr4P31060_001	Banana	cytosol, extracellular	1.32	1.22

Protein Annotations

EnsemblPlants:GSMUA_Achr4P31050_001	EnsemblPlants:GSMUA_Achr4T31050_001	EnsemblPlantsGene:GSMUA_Achr4G31050_001	Gene3D:3.10.110.10	InterPro:IPR000608	InterPro:IPR016135
InterPro:UBQ-conjugat_E2	InterPro:UBQ-conjugating_enzyme/RWD	PANTHER:PTHR43902	PANTHER:PTHR43902:SF4	PFAM:PF00179	PFscan:PS50127
SUPFAM:SSF54495	UniParc:UPI000296FA0F	UniProt:M0STL7	MapMan:35.1	:	:

Description

Ubiquitin-conjugating enzyme E2 36 [Source:GMGC_GENE;Acc:GSMUA_Achr4G31050_001]

Coordinates

chr4:+:28375709..28377316

Molecular Weight (calculated)

8342.1 Da

IEP (calculated)

4.604

GRAVY (calculated)

-0.209

Length

76 amino acids

Sequence
(BLAST)

1: MASSNLPPRI IKETQRLLSE PAPGISASPS EENMRYFNVM ILGPAQSPYE GGVFKLELFL PEEYPMAAPK VQASSM

Best Arabidopsis Sequence Match ( AT1G78870.3 )
(BLAST)

001: MANSNLPRRI IKETQRLLSE PAPGISASPS EDNMRYFNVM ILGPTQSPYE GGVFKLELFL PEEYPMAAPK VRFLTKIYHP NIDKLGRICL DILKDKWSPA
101: LQIRTVLLRY MS

Arabidopsis Description

UBC35UBC35 [Source:UniProtKB/TrEMBL;Acc:A0A178WFI9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.