Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G392400.1 | Wheat | cytosol | 77.6 | 97.39 |
| TraesCS1D01G400600.1 | Wheat | cytosol | 77.6 | 97.39 |
| Bra016626.1-P | Field mustard | cytosol | 76.04 | 95.42 |
| CDX87428 | Canola | cytosol | 76.04 | 95.42 |
| CDY26882 | Canola | cytosol | 71.88 | 95.17 |
| Bra035071.1-P | Field mustard | cytosol | 68.75 | 94.96 |
| CDX88485 | Canola | cytosol | 75.52 | 94.77 |
| Solyc10g007260.2.1 | Tomato | plastid | 75.52 | 94.77 |
| CDY54372 | Canola | cytosol | 75.52 | 94.77 |
| CDY35126 | Canola | cytosol | 75.52 | 94.77 |
| CDX96802 | Canola | cytosol | 75.52 | 94.77 |
| CDX83936 | Canola | cytosol | 75.52 | 94.77 |
| CDX81788 | Canola | cytosol | 75.52 | 94.77 |
| Bra026700.1-P | Field mustard | cytosol | 75.52 | 94.77 |
| Bra026018.1-P | Field mustard | cytosol | 75.52 | 94.77 |
| Bra008383.1-P | Field mustard | cytosol | 75.52 | 94.77 |
| CDY14587 | Canola | cytosol | 75.52 | 94.16 |
| KRH21984 | Soybean | endoplasmic reticulum, nucleus | 75.0 | 94.12 |
| KRH55097 | Soybean | endoplasmic reticulum | 75.0 | 94.12 |
| PGSC0003DMT400032251 | Potato | cytosol | 75.0 | 94.12 |
| PGSC0003DMT400054795 | Potato | cytosol | 75.0 | 94.12 |
| KRH26227 | Soybean | cytosol | 75.0 | 94.12 |
| CDY40025 | Canola | cytosol | 75.0 | 94.12 |
| Solyc07g062570.2.1 | Tomato | plastid | 74.48 | 93.46 |
| AT1G78870.2 | Thale cress | cytosol | 74.48 | 93.46 |
| CDY57941 | Canola | cytosol | 73.96 | 91.61 |
| Zm00001d009552_P002 | Maize | cytosol | 75.0 | 90.57 |
| HORVU1Hr1G086460.1 | Barley | endoplasmic reticulum, extracellular | 44.79 | 90.53 |
| HORVU5Hr1G055360.2 | Barley | cytosol, mitochondrion | 72.4 | 89.68 |
| AT1G16890.3 | Thale cress | cytosol | 75.0 | 88.89 |
| Zm00001d038995_P001 | Maize | cytosol | 75.0 | 88.34 |
| GSMUA_Achr4P31050_001 | Banana | cytosol | 34.9 | 88.16 |
| HORVU1Hr1G086610.1 | Barley | cytosol, plastid | 79.17 | 87.36 |
| VIT_19s0014g01460.t01 | Wine grape | cytosol | 68.23 | 84.52 |
| CDX79272 | Canola | cytosol | 73.96 | 83.53 |
| HORVU3Hr1G061790.1 | Barley | cytosol | 78.12 | 73.89 |
| KRH27335 | Soybean | endoplasmic reticulum | 55.73 | 70.86 |
| TraesCS1B01G420600.1 | Wheat | vacuole | 69.27 | 64.88 |
| HORVU3Hr1G059290.1 | Barley | cytosol | 36.98 | 48.3 |
| HORVU7Hr1G080800.2 | Barley | cytosol, nucleus, peroxisome | 36.98 | 47.97 |
| HORVU2Hr1G118240.5 | Barley | cytosol | 31.77 | 47.66 |
| HORVU0Hr1G002220.2 | Barley | cytosol, nucleus, peroxisome | 36.46 | 47.3 |
| HORVU5Hr1G053810.1 | Barley | cytosol | 36.46 | 47.3 |
| HORVU3Hr1G080790.2 | Barley | cytosol | 36.46 | 46.36 |
| HORVU1Hr1G069530.1 | Barley | cytosol, plastid | 38.02 | 34.27 |
| HORVU3Hr1G020470.1 | Barley | plastid | 30.21 | 25.55 |
| HORVU1Hr1G027600.1 | Barley | plastid | 29.17 | 23.73 |
Protein Annotations
| MapMan:19.2.2.1.4 | Gene3D:3.10.110.10 | UniProt:A0A287GLA0 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0016740 | EnsemblPlantsGene:HORVU1Hr1G086480 | EnsemblPlants:HORVU1Hr1G086480.1 | InterPro:IPR000608 |
| InterPro:IPR016135 | PFAM:PF00179 | ScanProsite:PS00183 | PFscan:PS50127 | PANTHER:PTHR43902 | PANTHER:PTHR43902:SF4 |
| SMART:SM00212 | SUPFAM:SSF54495 | InterPro:UBQ-conjugat_E2 | InterPro:UBQ-conjugating_AS | InterPro:UBQ-conjugating_enzyme/RWD | UniParc:UPI000B47F907 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr1H:+:537549795..537553184
Molecular Weight (calculated)
21840.6 Da
IEP (calculated)
10.329
GRAVY (calculated)
-0.347
Length
192 amino acids
Sequence
(BLAST)
(BLAST)
001: PRLRRRAKLR RRPPPPGLVR IPWPTANLPR RIIKETQRLL SEPAPGISAS PSEENMRYFN VMVLGPAQSP YEGGVFKLEL FLPEEYPMAA PKVRFLTKIY
101: HPNIDKLGRI CLDILKDKWS PALQIRTVLL SIQALLSAPN PDDPLSENVA KHWKSNEAEA VETAKEWTRM YASGAWQANV VMDVITLSHS WV
101: HPNIDKLGRI CLDILKDKWS PALQIRTVLL SIQALLSAPN PDDPLSENVA KHWKSNEAEA VETAKEWTRM YASGAWQANV VMDVITLSHS WV
001: MANSNLPRRI IKETQRLLSE PAPGISASPS EENMRYFNVM ILGPTQSPYE GGVFKLELFL PEEYPMAAPK VRFLTKIYHP NIDKLGRICL DILKDKWSPA
101: LQIRTVLLSI QALLSAPNPD DPLSENIAKH WKSNEAEAVE TAKEWTRLYA SGA
101: LQIRTVLLSI QALLSAPNPD DPLSENIAKH WKSNEAEAVE TAKEWTRLYA SGA
Arabidopsis Description
UBC36Ubiquitin-conjugating enzyme 36 [Source:UniProtKB/TrEMBL;Acc:F4I615]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.