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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • plastid 1
  • cytosol 2
  • mitochondrion 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra008383.1-P Field mustard cytosol 100.0 94.77
CDY14587 Canola cytosol 100.0 94.16
CDX87428 Canola cytosol 99.31 94.12
Solyc10g007260.2.1 Tomato plastid 98.62 93.46
CDY54372 Canola cytosol 98.62 93.46
TraesCS3A01G271800.1 Wheat cytosol 98.62 93.46
CDX96802 Canola cytosol 98.62 93.46
TraesCS3B01G305500.1 Wheat mitochondrion 98.62 93.46
TraesCS3D01G271400.1 Wheat cytosol 98.62 93.46
CDX88485 Canola cytosol 98.62 93.46
CDX83936 Canola cytosol 98.62 93.46
CDX81788 Canola cytosol 98.62 93.46
KRH26227 Soybean cytosol 98.62 93.46
CDY35126 Canola cytosol 98.62 93.46
CDY40025 Canola cytosol 97.93 92.81
KRH55097 Soybean endoplasmic reticulum 97.93 92.81
KRH21984 Soybean endoplasmic reticulum, nucleus 97.93 92.81
PGSC0003DMT400032251 Potato cytosol 97.93 92.81
PGSC0003DMT400054795 Potato cytosol 97.93 92.81
TraesCS1A01G392400.1 Wheat cytosol 97.93 92.81
TraesCS1D01G400600.1 Wheat cytosol 97.93 92.81
Solyc07g062570.2.1 Tomato plastid 97.24 92.16
Os01t0673600-01 Rice extracellular, plasma membrane, plastid 97.24 92.16
AT1G78870.2 Thale cress cytosol 97.24 92.16
EES03421 Sorghum cytosol 96.55 91.5
CDY57941 Canola cytosol 96.55 90.32
KXG35379 Sorghum cytosol 94.48 89.54
Zm00001d009552_P002 Maize cytosol 97.24 88.68
TraesCS5A01G181700.1 Wheat cytosol 92.41 87.58
TraesCS5B01G179700.1 Wheat cytosol 92.41 87.58
TraesCS5D01G186100.1 Wheat cytosol 92.41 87.58
HORVU1Hr1G086460.1 Barley endoplasmic reticulum, extracellular 57.24 87.37
Zm00001d038995_P001 Maize cytosol 97.24 86.5
HORVU5Hr1G055360.2 Barley cytosol, mitochondrion 92.41 86.45
Zm00001d043905_P003 Maize cytosol 96.55 82.84
VIT_19s0014g01460.t01 Wine grape cytosol 88.28 82.58
CDX79272 Canola cytosol 96.55 82.35
HORVU1Hr1G086610.1 Barley cytosol, plastid 97.93 81.61
GSMUA_Achr4P31050_001 Banana cytosol 42.76 81.58
HORVU1Hr1G086480.1 Barley mitochondrion 95.17 71.88
HORVU3Hr1G061790.1 Barley cytosol 98.62 70.44
Zm00001d011565_P002 Maize cytosol, mitochondrion 96.55 70.35
KRH27335 Soybean endoplasmic reticulum 71.03 68.21
TraesCS1B01G420600.1 Wheat vacuole 84.14 59.51
CDY37098 Canola cytosol 38.62 50.45
CDX73346 Canola cytosol 38.62 50.45
CDY23674 Canola cytosol 38.62 50.45
CDY25571 Canola cytosol 45.52 44.59
CDY14388 Canola cytosol 45.52 44.59
CDX96210 Canola cytosol 45.52 44.59
CDX89747 Canola cytosol 45.52 44.59
CDY34409 Canola cytosol 45.52 44.59
CDY35636 Canola cytosol 45.52 44.59
CDY51965 Canola cytosol 45.52 44.59
CDY49174 Canola cytosol 45.52 44.59
CDY47067 Canola cytosol 45.52 44.59
CDX76970 Canola cytosol 45.52 44.59
CDY17396 Canola cytosol 44.83 43.92
CDX71304 Canola cytosol, mitochondrion, nucleus 44.83 43.92
CDY31408 Canola cytosol 44.83 43.92
CDY02238 Canola cytosol 44.14 43.24
CDY68877 Canola cytosol, mitochondrion 44.83 40.62
CDY06521 Canola cytosol, plastid 44.83 40.62
CDY11958 Canola cytosol 45.52 38.15
CDY08368 Canola cytosol 40.0 36.48
CDY54342 Canola cytosol 45.52 35.87
CDY65274 Canola cytosol 35.86 35.62
CDY39315 Canola mitochondrion 37.24 35.53
CDY38761 Canola mitochondrion 36.55 34.87
CDY11654 Canola mitochondrion 36.55 34.87
CDY38184 Canola cytosol 41.38 33.33
CDY30726 Canola mitochondrion, nucleus 34.48 33.33
CDY66232 Canola mitochondrion, nucleus 34.48 33.33
CDY03040 Canola mitochondrion, nucleus 31.03 31.91
CDY36778 Canola cytosol 44.83 29.95
CDX73344 Canola cytosol 33.1 29.27
CDY06520 Canola cytosol 31.03 29.03
CDY68969 Canola mitochondrion 28.97 28.97
CDY23617 Canola plastid 36.55 28.96
CDY59253 Canola mitochondrion 35.86 28.42
CDX84034 Canola nucleus 20.0 27.1
CDX96859 Canola mitochondrion 35.17 26.98
CDY39254 Canola cytosol 20.0 25.0
Protein Annotations
MapMan:19.2.2.1.4Gene3D:3.10.110.10GO:A0A078GNY6UniProt:A0A078GNY6EnsemblPlants:CDY26882ProteinID:CDY26882
ProteinID:CDY26882.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005524
GO:GO:0016740EnsemblPlantsGene:GSBRNA2T00036562001InterPro:IPR000608InterPro:IPR016135PFAM:PF00179ScanProsite:PS00183
PFscan:PS50127PANTHER:PTHR43902PANTHER:PTHR43902:SF4MetaCyc:PWY-7511SMART:SM00212SUPFAM:SSF54495
InterPro:UBQ-conjugat_E2InterPro:UBQ-conjugating_ASInterPro:UBQ-conjugating_enzyme/RWDUniPathway:UPA00143UniParc:UPI0004EE58A6:
Description
BnaA02g19070DBnaA02g19070D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GNY6]
Coordinates
chrLK032195:+:411743..413324
Molecular Weight (calculated)
16404.9 Da
IEP (calculated)
7.511
GRAVY (calculated)
-0.283
Length
145 amino acids
Sequence
(BLAST)
001: MANSNLPRRI IKETQRLLSE PAPGISASPS EENMRYFNVM VLGGVFKLEL FLPEEYPMAA PKVRFLTKIY HPNIDKLGRI CLDILKDKWS PALQIRTVLL
101: SIQALLSAPN PDDPLSENIA KHWKSNEAEA VETAKEWTRL YASGE
Best Arabidopsis Sequence Match ( AT1G16890.1 )
(BLAST)
001: MRYFNVMILG PTQSPYEGGV FKLELFLPEE YPMAAPKVRF LTKIYHPNID KLGRICLDIL KDKWSPALQI RTVLLSIQAL LSAPNPDDPL SENIAKHWKS
101: NEAEAVETAK EWTRLYASGA
Arabidopsis Description
UBC36Ubiquitin-conjugating enzyme 36 [Source:UniProtKB/TrEMBL;Acc:F4I615]
SUBAcon: [plastid,vacuole,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.