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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • plastid 1
  • cytosol 2
  • mitochondrion 1
  • cytoskeleton 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytoskeleton, cytosol, nucleus
BaCelLo:nucleus
iPSORT:plastid
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytoskeleton
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY37098 Canola cytosol 98.2 98.2
CDX73346 Canola cytosol 97.3 97.3
Bra032244.1-P Field mustard cytosol 100.0 74.0
CDY65274 Canola cytosol 78.38 59.59
AT1G36340.2 Thale cress cytosol 72.97 52.6
CDX73344 Canola cytosol 67.57 45.73
CDY14388 Canola cytosol 59.46 44.59
CDY49174 Canola cytosol 59.46 44.59
CDY47067 Canola cytosol 59.46 44.59
CDY35636 Canola cytosol 59.46 44.59
CDX96210 Canola cytosol 59.46 44.59
CDX89747 Canola cytosol 58.56 43.92
CDY02238 Canola cytosol 58.56 43.92
CDY31408 Canola cytosol 57.66 43.24
CDX76970 Canola cytosol 57.66 43.24
CDY51965 Canola cytosol 57.66 43.24
CDX71304 Canola cytosol, mitochondrion, nucleus 56.76 42.57
CDY17396 Canola cytosol 56.76 42.57
CDY25571 Canola cytosol 56.76 42.57
CDY34409 Canola cytosol 56.76 42.57
CDY68877 Canola cytosol, mitochondrion 59.46 41.25
CDY06521 Canola cytosol, plastid 59.46 41.25
CDY54372 Canola cytosol 54.95 39.87
CDX81788 Canola cytosol 54.95 39.87
CDX83936 Canola cytosol 54.95 39.87
CDY35126 Canola cytosol 54.95 39.87
CDX88485 Canola cytosol 54.05 39.22
CDX87428 Canola cytosol 54.05 39.22
CDY40025 Canola cytosol 54.05 39.22
CDY14587 Canola cytosol 54.05 38.96
CDY57941 Canola cytosol 54.05 38.71
CDY26882 Canola cytosol 50.45 38.62
CDX96802 Canola cytosol 53.15 38.56
CDY11958 Canola cytosol 57.66 36.99
CDY54342 Canola cytosol 59.46 35.87
CDY08368 Canola cytosol 51.35 35.85
CDX79272 Canola cytosol 53.15 34.71
CDY38761 Canola mitochondrion 44.14 32.24
CDY11654 Canola mitochondrion 44.14 32.24
CDY38184 Canola cytosol 52.25 32.22
CDY06520 Canola cytosol 44.14 31.61
CDY30726 Canola mitochondrion, nucleus 40.54 30.0
CDY66232 Canola mitochondrion, nucleus 40.54 30.0
CDY03040 Canola mitochondrion, nucleus 37.84 29.79
CDY39315 Canola mitochondrion 40.54 29.61
CDY36778 Canola cytosol 56.76 29.03
CDY68969 Canola mitochondrion 36.94 28.28
CDY59253 Canola mitochondrion 45.05 27.32
CDY23617 Canola plastid 45.05 27.32
CDX84034 Canola nucleus 22.52 23.36
CDY39254 Canola cytosol 24.32 23.28
CDX96859 Canola mitochondrion 36.94 21.69
Protein Annotations
Gene3D:3.10.110.10MapMan:35.1GO:A0A078GEE5UniProt:A0A078GEE5EnsemblPlants:CDY23674ProteinID:CDY23674
ProteinID:CDY23674.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005524
GO:GO:0016740EnsemblPlantsGene:GSBRNA2T00023934001InterPro:IPR000608InterPro:IPR016135PFAM:PF00179ScanProsite:PS00183
PFscan:PS50127PANTHER:PTHR24068PANTHER:PTHR24068:SF74MetaCyc:PWY-7511SMART:SM00212SUPFAM:SSF54495
InterPro:UBQ-conjugat_E2InterPro:UBQ-conjugating_ASInterPro:UBQ-conjugating_enzyme/RWDUniPathway:UPA00143UniParc:UPI0004EDCA65:
Description
BnaA05g17550DBnaA05g17550D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GEE5]
Coordinates
chrLK032146:-:409001..409693
Molecular Weight (calculated)
12571.1 Da
IEP (calculated)
6.519
GRAVY (calculated)
-0.359
Length
111 amino acids
Sequence
(BLAST)
001: MIQGPEGTPY AGGMFSIDIK FPKNYPFTAP KFTFKTQIYH PNINSEGSIC LDILKDKWSP PLTVEKVLLS ITSLLADPNP DDPLVGEIGE LFKSNKFLFN
101: QRAREWTERH A
Best Arabidopsis Sequence Match ( AT1G36340.1 )
(BLAST)
001: MFKKMDKKAA QRIAMEYRAM ISKESLFSIG QNSNNIYEWT AVIRGPDGTP YEGGMFNLSI KFPTDYPFKP PKFTFKTPIY HPNINDEGSI CMNILKDKWT
101: PALMVEKVLL SILLLLEKPN PDDPLVPEIG QLFKNNRFQF DQRAREFTAR HANN
Arabidopsis Description
UBC31Probable ubiquitin-conjugating enzyme E2 31 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8X7]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.