Factsheet for Bra032244.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY23674	Canola	cytosol	74.0	100.0
AT1G36340.2	Thale cress	cytosol	67.33	65.58
Bra027688.1-P	Field mustard	cytosol	41.33	55.86
Bra001347.1-P	Field mustard	cytosol	52.67	53.38
Bra041101.1-P	Field mustard	cytosol	52.67	53.38
Bra029076.1-P	Field mustard	cytosol	51.33	52.03
Bra022645.1-P	Field mustard	cytosol	51.33	52.03
Bra003066.1-P	Field mustard	cytosol	51.33	52.03
Bra035605.1-P	Field mustard	cytosol	50.67	51.35
Bra013049.1-P	Field mustard	cytosol	49.33	50.0
Bra028946.1-P	Field mustard	cytosol	45.33	48.57
Bra002842.1-P	Field mustard	cytosol	47.33	47.97
Bra027749.1-P	Field mustard	nucleus	46.67	46.05
Bra026700.1-P	Field mustard	cytosol	45.33	44.44
Bra026018.1-P	Field mustard	cytosol	45.33	44.44
Bra008383.1-P	Field mustard	cytosol	44.67	43.79
Bra016626.1-P	Field mustard	cytosol	44.67	43.79
Bra035071.1-P	Field mustard	cytosol	39.33	42.45
Bra001995.1-P	Field mustard	cytosol	48.0	40.0
Bra017410.1-P	Field mustard	mitochondrion, nucleus	37.33	36.84
Bra016264.1-P	Field mustard	mitochondrion	37.33	36.84
Bra026582.1-P	Field mustard	mitochondrion, nucleus	36.67	36.18
Bra024808.1-P	Field mustard	mitochondrion, nucleus	36.67	36.18
Bra029252.1-P	Field mustard	mitochondrion, nucleus	36.0	36.0
Bra026222.1-P	Field mustard	mitochondrion, nucleus	36.0	35.53
Bra026833.1-P	Field mustard	mitochondrion, nucleus	36.0	35.53
Bra027422.1-P	Field mustard	plastid	38.67	31.69
Bra016704.1-P	Field mustard	nucleus	32.0	31.58
Bra016703.1-P	Field mustard	nucleus	36.0	25.71
Bra029711.1-P	Field mustard	nucleus	52.0	25.16

Protein Annotations

Gene3D:3.10.110.10	MapMan:35.1	EnsemblPlantsGene:Bra032244	EnsemblPlants:Bra032244.1	EnsemblPlants:Bra032244.1-P	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0016740	InterPro:IPR000608	InterPro:IPR016135
UniProt:M4ETW2	PFAM:PF00179	ScanProsite:PS00183	PFscan:PS50127	PANTHER:PTHR24068	PANTHER:PTHR24068:SF74
SMART:SM00212	SUPFAM:SSF54495	InterPro:UBQ-conjugat_E2	InterPro:UBQ-conjugating_AS	InterPro:UBQ-conjugating_enzyme/RWD	UniParc:UPI0002547D7F

Description

AT1G36340 (E=2e-058) UBC31 | UBC31 (ubiquitin-conjugating enzyme 31); small conjugating protein ligase/ ubiquitin-protein ligase

Coordinates

chrA05:+:12424149..12425114

Molecular Weight (calculated)

17194.6 Da

IEP (calculated)

8.438

GRAVY (calculated)

-0.523

Length

150 amino acids

Sequence
(BLAST)

001: MSIEKKAMQR IEKEFKDMTS KDSLYSIGRD SNNLFKWNAM IQGPEGTPYA GGMFSIDIKF PKNYPFTAPK FTFKTQIYHP NINSEGSICL DILKDKWSPP
101: LTVEKVLLSI TSLLADPNPD DPLVGEIGEL FKSNKFLFNQ RAREWTERHA

Best Arabidopsis Sequence Match ( AT1G36340.1 )
(BLAST)

001: MFKKMDKKAA QRIAMEYRAM ISKESLFSIG QNSNNIYEWT AVIRGPDGTP YEGGMFNLSI KFPTDYPFKP PKFTFKTPIY HPNINDEGSI CMNILKDKWT
101: PALMVEKVLL SILLLLEKPN PDDPLVPEIG QLFKNNRFQF DQRAREFTAR HANN

Arabidopsis Description

UBC31Probable ubiquitin-conjugating enzyme E2 31 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8X7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.