Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY37098 | Canola | cytosol | 52.6 | 72.97 |
| CDY23674 | Canola | cytosol | 52.6 | 72.97 |
| CDX73346 | Canola | cytosol | 51.95 | 72.07 |
| Bra032244.1-P | Field mustard | cytosol | 65.58 | 67.33 |
| CDY65274 | Canola | cytosol | 55.84 | 58.9 |
| AT3G08690.1 | Thale cress | cytosol | 46.75 | 48.65 |
| AT5G56150.1 | Thale cress | cytosol, nucleus, peroxisome | 45.45 | 47.3 |
| AT3G08700.1 | Thale cress | cytosol | 45.45 | 46.98 |
| AT5G41700.4 | Thale cress | cytosol, mitochondrion, peroxisome | 44.81 | 46.31 |
| AT5G53300.1 | Thale cress | cytosol, nucleus, peroxisome | 44.16 | 45.95 |
| AT2G16740.1 | Thale cress | cytosol | 44.16 | 45.95 |
| CDX73344 | Canola | cytosol | 46.75 | 43.9 |
| AT1G78870.2 | Thale cress | cytosol | 40.26 | 40.52 |
| AT4G27960.2 | Thale cress | endoplasmic reticulum, golgi | 44.81 | 38.76 |
| AT1G16890.3 | Thale cress | cytosol | 40.26 | 38.27 |
| AT3G13550.1 | Thale cress | mitochondrion | 42.21 | 35.71 |
| AT2G02760.2 | Thale cress | mitochondrion, nucleus | 35.06 | 35.53 |
| AT1G64230.5 | Thale cress | cytosol | 43.51 | 35.26 |
| AT1G14400.1 | Thale cress | mitochondrion, nucleus | 34.42 | 34.87 |
| AT5G62540.1 | Thale cress | nucleus | 33.77 | 34.67 |
Protein Annotations
| Gene3D:3.10.110.10 | MapMan:35.1 | EntrezGene:840541 | ProteinID:AAG52201.1 | ProteinID:AEE31861.1 | ProteinID:ANM59827.1 |
| ArrayExpress:AT1G36340 | EnsemblPlantsGene:AT1G36340 | RefSeq:AT1G36340 | TAIR:AT1G36340 | RefSeq:AT1G36340-TAIR-G | EnsemblPlants:AT1G36340.2 |
| Unigene:At.49943 | EMBL:BT015146 | EMBL:BT015658 | EMBL:DQ027044 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005773 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR000608 | InterPro:IPR016135 | RefSeq:NP_001319154.1 |
| RefSeq:NP_564472.1 | PFAM:PF00179 | PFscan:PS50127 | PANTHER:PTHR24068 | PANTHER:PTHR24068:SF74 | UniProt:Q9C8X7 |
| SMART:SM00212 | SUPFAM:SSF54495 | Symbol:UBC31 | InterPro:UBQ-conjugat_E2 | InterPro:UBQ-conjugating_enzyme/RWD | UniParc:UPI000009CD95 |
| SEG:seg | : | : | : | : | : |
Description
UBC31Probable ubiquitin-conjugating enzyme E2 31 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8X7]
Coordinates
chr1:-:13683663..13685004
Molecular Weight (calculated)
17833.6 Da
IEP (calculated)
9.629
GRAVY (calculated)
-0.485
Length
154 amino acids
Sequence
(BLAST)
(BLAST)
001: MFKKMDKKAA QRIAMEYRAM ISKESLFSIG QNSNNIYEWT AVIRGPDGTP YEGGMFNLSI KFPTDYPFKP PKFTFKTPIY HPNINDEGSI CMNILKDKWT
101: PALMVEKVLL SILLLLEKPN PDDPLVPEIG QLFKNNRFQF DQRAREFTAR HANN
101: PALMVEKVLL SILLLLEKPN PDDPLVPEIG QLFKNNRFQF DQRAREFTAR HANN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.