Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra001347.1-P | Field mustard | cytosol | 97.97 | 97.97 |
| Bra041101.1-P | Field mustard | cytosol | 97.3 | 97.3 |
| TraesCS1A01G301600.1 | Wheat | cytosol, nucleus, peroxisome | 94.59 | 94.59 |
| HORVU0Hr1G002220.2 | Barley | cytosol, nucleus, peroxisome | 94.59 | 94.59 |
| TraesCS3D01G336300.1 | Wheat | cytosol, nucleus, peroxisome | 94.59 | 94.59 |
| TraesCS1B01G311400.1 | Wheat | cytosol, nucleus, peroxisome | 94.59 | 94.59 |
| EES19701 | Sorghum | cytosol | 94.59 | 94.59 |
| TraesCS3B01G374500.1 | Wheat | cytosol, nucleus, peroxisome | 94.59 | 94.59 |
| TraesCS1D01G301300.1 | Wheat | cytosol, nucleus, peroxisome | 94.59 | 94.59 |
| TraesCS3A01G342500.1 | Wheat | cytosol, nucleus, peroxisome | 94.59 | 94.59 |
| AT5G53300.1 | Thale cress | cytosol, nucleus, peroxisome | 93.92 | 93.92 |
| HORVU3Hr1G080790.2 | Barley | cytosol | 94.59 | 92.72 |
| AT5G41700.4 | Thale cress | cytosol, mitochondrion, peroxisome | 91.22 | 90.6 |
| Os01t0819400-00 | Rice | cytosol | 93.92 | 87.97 |
| AT5G56150.1 | Thale cress | cytosol, nucleus, peroxisome | 87.16 | 87.16 |
| Zm00001d010618_P003 | Maize | cytosol | 94.59 | 85.89 |
| AT2G16740.1 | Thale cress | cytosol | 84.46 | 84.46 |
| AT3G08700.1 | Thale cress | cytosol | 81.76 | 81.21 |
| AT4G27960.2 | Thale cress | endoplasmic reticulum, golgi | 91.89 | 76.4 |
| AT1G64230.5 | Thale cress | cytosol | 90.54 | 70.53 |
| HORVU1Hr1G069530.1 | Barley | cytosol, plastid | 94.59 | 65.73 |
| AT1G78870.2 | Thale cress | cytosol | 48.65 | 47.06 |
| AT1G36340.2 | Thale cress | cytosol | 48.65 | 46.75 |
| Bra029711.1-P | Field mustard | nucleus | 95.95 | 45.81 |
| AT1G16890.3 | Thale cress | cytosol | 50.0 | 45.68 |
| AT5G62540.1 | Thale cress | nucleus | 43.24 | 42.67 |
| AT1G14400.1 | Thale cress | mitochondrion, nucleus | 43.24 | 42.11 |
| AT2G02760.2 | Thale cress | mitochondrion, nucleus | 42.57 | 41.45 |
| GSMUA_Achr5P04210_001 | Banana | cytosol | 46.62 | 40.83 |
| AT3G13550.1 | Thale cress | mitochondrion | 48.65 | 39.56 |
Protein Annotations
| MapMan:19.2.2.5.2 | Gene3D:3.10.110.10 | EntrezGene:820016 | ProteinID:AAG51362.1 | ProteinID:AEE74664.1 | ProteinID:AEE74665.1 |
| EMBL:AK228254 | ArrayExpress:AT3G08690 | EnsemblPlantsGene:AT3G08690 | RefSeq:AT3G08690 | TAIR:AT3G08690 | RefSeq:AT3G08690-TAIR-G |
| EnsemblPlants:AT3G08690.1 | TAIR:AT3G08690.1 | EMBL:AY063869 | EMBL:AY086109 | EMBL:AY091223 | Unigene:At.202 |
| EMBL:DQ027025 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004842 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR000608 |
| InterPro:IPR016135 | EMBL:L00641 | RefSeq:NP_001189841.1 | RefSeq:NP_566331.1 | UniProt:P35134 | PFAM:PF00179 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | ScanProsite:PS00183 | PFscan:PS50127 | PANTHER:PTHR24068 | PANTHER:PTHR24068:SF55 | SMART:SM00212 |
| SUPFAM:SSF54495 | Symbol:UBC11 | InterPro:UBQ-conjugat_E2 | InterPro:UBQ-conjugating_AS | InterPro:UBQ-conjugating_enzyme/RWD | UniParc:UPI0000001409 |
| EMBL:Z14992 | : | : | : | : | : |
Description
UBC11Ubiquitin-conjugating enzyme E2 11 [Source:UniProtKB/Swiss-Prot;Acc:P35134]
Coordinates
chr3:+:2641012..2642919
Molecular Weight (calculated)
16551.9 Da
IEP (calculated)
8.064
GRAVY (calculated)
-0.374
Length
148 amino acids
Sequence
(BLAST)
(BLAST)
001: MASKRILKEL KDLQKDPPSN CSAGPVAEDM FHWQATIMGP PESPYAGGVF LVSIHFPPDY PFKPPKVSFK TKVYHPNINS NGSICLDILK EQWSPALTIS
101: KVLLSICSLL TDPNPDDPLV PEIAHMYKTD RSKYESTARS WTQKYAMG
101: KVLLSICSLL TDPNPDDPLV PEIAHMYKTD RSKYESTARS WTQKYAMG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.