Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY35126 | Canola | cytosol | 93.83 | 99.35 |
| CDX81788 | Canola | cytosol | 93.83 | 99.35 |
| Bra026018.1-P | Field mustard | cytosol | 93.83 | 99.35 |
| Solyc10g007260.2.1 | Tomato | plastid | 93.83 | 99.35 |
| TraesCS3B01G305500.1 | Wheat | mitochondrion | 93.21 | 98.69 |
| CDX83936 | Canola | cytosol | 93.21 | 98.69 |
| Bra026700.1-P | Field mustard | cytosol | 93.21 | 98.69 |
| Bra016626.1-P | Field mustard | cytosol | 93.21 | 98.69 |
| CDY40025 | Canola | cytosol | 93.21 | 98.69 |
| CDY54372 | Canola | cytosol | 93.21 | 98.69 |
| TraesCS3A01G271800.1 | Wheat | cytosol | 93.21 | 98.69 |
| TraesCS3D01G271400.1 | Wheat | cytosol | 93.21 | 98.69 |
| PGSC0003DMT400054795 | Potato | cytosol | 93.21 | 98.69 |
| KRH21984 | Soybean | endoplasmic reticulum, nucleus | 93.21 | 98.69 |
| KRH26227 | Soybean | cytosol | 93.21 | 98.69 |
| PGSC0003DMT400032251 | Potato | cytosol | 93.21 | 98.69 |
| KRH55097 | Soybean | endoplasmic reticulum | 93.21 | 98.69 |
| Solyc07g062570.2.1 | Tomato | plastid | 92.59 | 98.04 |
| AT1G78870.2 | Thale cress | cytosol | 92.59 | 98.04 |
| CDX96802 | Canola | cytosol | 92.59 | 98.04 |
| Os01t0673600-01 | Rice | extracellular, plasma membrane, plastid | 91.98 | 97.39 |
| TraesCS1A01G392400.1 | Wheat | cytosol | 91.36 | 96.73 |
| TraesCS1D01G400600.1 | Wheat | cytosol | 91.36 | 96.73 |
| EES03421 | Sorghum | cytosol | 91.36 | 96.73 |
| KXG35379 | Sorghum | cytosol | 89.51 | 94.77 |
| Zm00001d009552_P002 | Maize | cytosol | 91.98 | 93.71 |
| TraesCS5A01G181700.1 | Wheat | cytosol | 88.27 | 93.46 |
| TraesCS5B01G179700.1 | Wheat | cytosol | 88.27 | 93.46 |
| TraesCS5D01G186100.1 | Wheat | cytosol | 88.27 | 93.46 |
| HORVU5Hr1G055360.2 | Barley | cytosol, mitochondrion | 88.27 | 92.26 |
| Zm00001d038995_P001 | Maize | cytosol | 91.98 | 91.41 |
| GSMUA_Achr4P31050_001 | Banana | cytosol | 42.59 | 90.79 |
| HORVU1Hr1G086460.1 | Barley | endoplasmic reticulum, extracellular | 51.85 | 88.42 |
| VIT_19s0014g01460.t01 | Wine grape | cytosol | 83.95 | 87.74 |
| Zm00001d043905_P003 | Maize | cytosol | 91.36 | 87.57 |
| HORVU1Hr1G086610.1 | Barley | cytosol, plastid | 91.36 | 85.06 |
| HORVU1Hr1G086480.1 | Barley | mitochondrion | 88.89 | 75.0 |
| HORVU3Hr1G061790.1 | Barley | cytosol | 93.21 | 74.38 |
| Zm00001d011565_P002 | Maize | cytosol, mitochondrion | 90.74 | 73.87 |
| KRH27335 | Soybean | endoplasmic reticulum | 68.52 | 73.51 |
| TraesCS1B01G420600.1 | Wheat | vacuole | 81.48 | 64.39 |
| AT3G08690.1 | Thale cress | cytosol | 45.68 | 50.0 |
| AT2G16740.1 | Thale cress | cytosol | 44.44 | 48.65 |
| AT5G53300.1 | Thale cress | cytosol, nucleus, peroxisome | 44.44 | 48.65 |
| AT5G41700.4 | Thale cress | cytosol, mitochondrion, peroxisome | 43.83 | 47.65 |
| AT5G56150.1 | Thale cress | cytosol, nucleus, peroxisome | 43.21 | 47.3 |
| AT3G08700.1 | Thale cress | cytosol | 41.98 | 45.64 |
| AT4G27960.2 | Thale cress | endoplasmic reticulum, golgi | 44.44 | 40.45 |
| AT1G36340.2 | Thale cress | cytosol | 38.27 | 40.26 |
| AT5G62540.1 | Thale cress | nucleus | 34.57 | 37.33 |
| AT1G64230.5 | Thale cress | cytosol | 43.21 | 36.84 |
| AT2G02760.2 | Thale cress | mitochondrion, nucleus | 33.95 | 36.18 |
| AT1G14400.1 | Thale cress | mitochondrion, nucleus | 33.95 | 36.18 |
| AT3G13550.1 | Thale cress | mitochondrion | 35.19 | 31.32 |
Protein Annotations
| MapMan:19.2.2.1.4 | Gene3D:3.10.110.10 | EntrezGene:838260 | ProteinID:AEE29517.1 | ArrayExpress:AT1G16890 | EnsemblPlantsGene:AT1G16890 |
| RefSeq:AT1G16890 | TAIR:AT1G16890 | RefSeq:AT1G16890-TAIR-G | EnsemblPlants:AT1G16890.3 | TAIR:AT1G16890.3 | UniProt:F4I615 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004842 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 |
| GO:GO:0005886 | GO:GO:0006464 | GO:GO:0006511 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009056 | GO:GO:0009653 | GO:GO:0009987 | GO:GO:0010039 | GO:GO:0010053 | GO:GO:0016020 |
| GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0030154 | InterPro:IPR000608 | InterPro:IPR016135 |
| RefSeq:NP_001185017.1 | PFAM:PF00179 | PO:PO:0000005 | PO:PO:0000293 | ScanProsite:PS00183 | PFscan:PS50127 |
| PANTHER:PTHR43902 | PANTHER:PTHR43902:SF4 | SMART:SM00212 | SUPFAM:SSF54495 | Symbol:UBC36 | InterPro:UBQ-conjugat_E2 |
| InterPro:UBQ-conjugating_AS | InterPro:UBQ-conjugating_enzyme/RWD | UniParc:UPI0001E92B62 | : | : | : |
Description
UBC36Ubiquitin-conjugating enzyme 36 [Source:UniProtKB/TrEMBL;Acc:F4I615]
Coordinates
chr1:-:5776177..5778484
Molecular Weight (calculated)
18215.9 Da
IEP (calculated)
6.536
GRAVY (calculated)
-0.320
Length
162 amino acids
Sequence
(BLAST)
(BLAST)
001: MANSNLPRRI IKETQRLLSE PGNFITSFDP SPGISASPSE ENMRYFNVMI LGPTQSPYEG GVFKLELFLP EEYPMAAPKV RFLTKIYHPN IDKLGRICLD
101: ILKDKWSPAL QIRTVLLSIQ ALLSAPNPDD PLSENIAKHW KSNEAEAVET AKEWTRLYAS GA
101: ILKDKWSPAL QIRTVLLSIQ ALLSAPNPDD PLSENIAKHW KSNEAEAVET AKEWTRLYAS GA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.