Factsheet for HORVU3Hr1G061790.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 1
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G271800.1	Wheat	cytosol	75.37	100.0
TraesCS3B01G305500.1	Wheat	mitochondrion	75.37	100.0
TraesCS3D01G271400.1	Wheat	cytosol	75.37	100.0
Bra026018.1-P	Field mustard	cytosol	74.88	99.35
Bra026700.1-P	Field mustard	cytosol	74.88	99.35
CDX81788	Canola	cytosol	74.88	99.35
CDX83936	Canola	cytosol	74.88	99.35
Solyc10g007260.2.1	Tomato	plastid	74.88	99.35
CDY54372	Canola	cytosol	74.88	99.35
CDY35126	Canola	cytosol	74.88	99.35
KRH21984	Soybean	endoplasmic reticulum, nucleus	74.38	98.69
KRH26227	Soybean	cytosol	74.38	98.69
KRH55097	Soybean	endoplasmic reticulum	74.38	98.69
Os01t0673600-01	Rice	extracellular, plasma membrane, plastid	74.38	98.69
PGSC0003DMT400032251	Potato	cytosol	74.38	98.69
PGSC0003DMT400054795	Potato	cytosol	74.38	98.69
Bra016626.1-P	Field mustard	cytosol	74.38	98.69
CDY40025	Canola	cytosol	74.38	98.69
CDX87428	Canola	cytosol	74.38	98.69
CDY26882	Canola	cytosol	70.44	98.62
Bra035071.1-P	Field mustard	cytosol	67.49	98.56
Solyc07g062570.2.1	Tomato	plastid	73.89	98.04
AT1G78870.2	Thale cress	cytosol	73.89	98.04
Bra008383.1-P	Field mustard	cytosol	73.89	98.04
CDX88485	Canola	cytosol	73.89	98.04
CDX96802	Canola	cytosol	73.89	98.04
EES03421	Sorghum	cytosol	73.89	98.04
CDY14587	Canola	cytosol	73.89	97.4
CDY57941	Canola	cytosol	72.41	94.84
GSMUA_Achr4P31050_001	Banana	cytosol	34.98	93.42
AT1G16890.3	Thale cress	cytosol	74.38	93.21
HORVU5Hr1G055360.2	Barley	cytosol, mitochondrion	70.44	92.26
HORVU1Hr1G086610.1	Barley	cytosol, plastid	76.85	89.66
Zm00001d043905_P003	Maize	cytosol	73.89	88.76
HORVU1Hr1G086460.1	Barley	endoplasmic reticulum, extracellular	41.38	88.42
VIT_19s0014g01460.t01	Wine grape	cytosol	67.0	87.74
CDX79272	Canola	cytosol	72.41	86.47
HORVU1Hr1G086480.1	Barley	mitochondrion	73.89	78.12
Zm00001d011565_P002	Maize	cytosol, mitochondrion	73.4	74.87
KRH27335	Soybean	endoplasmic reticulum	54.68	73.51
HORVU3Hr1G059290.1	Barley	cytosol	35.96	49.66
HORVU7Hr1G080800.2	Barley	cytosol, nucleus, peroxisome	35.96	49.32
HORVU2Hr1G118240.5	Barley	cytosol	31.03	49.22
HORVU5Hr1G053810.1	Barley	cytosol	35.47	48.65
HORVU0Hr1G002220.2	Barley	cytosol, nucleus, peroxisome	35.47	48.65
HORVU3Hr1G080790.2	Barley	cytosol	35.47	47.68
HORVU1Hr1G069530.1	Barley	cytosol, plastid	35.96	34.27
HORVU3Hr1G020470.1	Barley	plastid	29.06	25.99
HORVU1Hr1G027600.1	Barley	plastid	29.06	25.0

Protein Annotations

MapMan:19.2.2.1.4	Gene3D:3.10.110.10	UniProt:A0A287LA57	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005524	GO:GO:0016740	EnsemblPlantsGene:HORVU3Hr1G061790	EnsemblPlants:HORVU3Hr1G061790.1	InterPro:IPR000608
InterPro:IPR016135	PFAM:PF00179	ScanProsite:PS00183	PFscan:PS50127	PANTHER:PTHR43902	PANTHER:PTHR43902:SF4
SMART:SM00212	SUPFAM:SSF54495	InterPro:UBQ-conjugat_E2	InterPro:UBQ-conjugating_AS	InterPro:UBQ-conjugating_enzyme/RWD	UniParc:UPI000B4673BD

Description

No Description!

Coordinates

chrchr3H:+:470477288..470480401

Molecular Weight (calculated)

22719.5 Da

IEP (calculated)

9.431

GRAVY (calculated)

-0.385

Length

203 amino acids

Sequence
(BLAST)

001: SRTASVRIIG SIHPHCLPRV LPPSQLTPPP HETPAPHSSE RRKLLPRLDP MANSNLPRRI IKETQRLLSE PAPGISASPS EENMRYFNVM ILGPAQSPYE
101: GGVFKLELFL PEEYPMAAPK VRFLTKIYHP NIDKLGRICL DILKDKWSPA LQIRTVLLSI QALLSAPNPD DPLSENIAKH WKSNEAEAVE TAKEWTRLYA
201: SGA

Best Arabidopsis Sequence Match ( AT1G16890.2 )
(BLAST)

001: MANSNLPRRI IKETQRLLSE PAPGISASPS EENMRYFNVM ILGPTQSPYE GGVFKLELFL PEEYPMAAPK VRFLTKIYHP NIDKLGRICL DILKDKWSPA
101: LQIRTVLLSI QALLSAPNPD DPLSENIAKH WKSNEAEAVE TAKEWTRLYA SGA

Arabidopsis Description

UBC36Ubiquitin-conjugating enzyme 36 [Source:UniProtKB/TrEMBL;Acc:F4I615]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.