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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 2
  • cytosol 2
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, plastid
BaCelLo:plastid
iPSORT:plastid
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:mitochondrion
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX87428 Canola cytosol 99.35 99.35
CDY54372 Canola cytosol 98.69 98.69
CDX83936 Canola cytosol 98.69 98.69
CDY26882 Canola cytosol 93.46 98.62
CDY14587 Canola cytosol 98.69 98.05
Solyc10g007260.2.1 Tomato plastid 98.04 98.04
CDY35126 Canola cytosol 98.04 98.04
CDX81788 Canola cytosol 98.04 98.04
TraesCS3A01G271800.1 Wheat cytosol 98.04 98.04
TraesCS3B01G305500.1 Wheat mitochondrion 98.04 98.04
CDX96802 Canola cytosol 98.04 98.04
TraesCS3D01G271400.1 Wheat cytosol 98.04 98.04
KRH55097 Soybean endoplasmic reticulum 97.39 97.39
TraesCS1A01G392400.1 Wheat cytosol 97.39 97.39
TraesCS1D01G400600.1 Wheat cytosol 97.39 97.39
KRH21984 Soybean endoplasmic reticulum, nucleus 97.39 97.39
PGSC0003DMT400054795 Potato cytosol 97.39 97.39
PGSC0003DMT400032251 Potato cytosol 97.39 97.39
CDY40025 Canola cytosol 97.39 97.39
KRH26227 Soybean cytosol 97.39 97.39
CDY57941 Canola cytosol 98.04 96.77
AT1G78870.2 Thale cress cytosol 96.73 96.73
Os01t0673600-01 Rice extracellular, plasma membrane, plastid 96.73 96.73
Solyc07g062570.2.1 Tomato plastid 96.73 96.73
EES03421 Sorghum cytosol 96.08 96.08
KXG35379 Sorghum cytosol 94.77 94.77
Zm00001d009552_P002 Maize cytosol 96.73 93.08
TraesCS5A01G181700.1 Wheat cytosol 92.16 92.16
TraesCS5B01G179700.1 Wheat cytosol 92.16 92.16
TraesCS5D01G186100.1 Wheat cytosol 92.16 92.16
HORVU5Hr1G055360.2 Barley cytosol, mitochondrion 92.16 90.97
Zm00001d038995_P001 Maize cytosol 96.73 90.8
GSMUA_Achr4P31050_001 Banana cytosol 44.44 89.47
HORVU1Hr1G086460.1 Barley endoplasmic reticulum, extracellular 54.9 88.42
CDX79272 Canola cytosol 98.04 88.24
Zm00001d043905_P003 Maize cytosol 96.08 86.98
VIT_19s0014g01460.t01 Wine grape cytosol 87.58 86.45
HORVU1Hr1G086610.1 Barley cytosol, plastid 97.39 85.63
HORVU1Hr1G086480.1 Barley mitochondrion 94.77 75.52
HORVU3Hr1G061790.1 Barley cytosol 98.04 73.89
Zm00001d011565_P002 Maize cytosol, mitochondrion 95.42 73.37
KRH27335 Soybean endoplasmic reticulum 71.24 72.19
TraesCS1B01G420600.1 Wheat vacuole 84.31 62.93
CDY37098 Canola cytosol 39.22 54.05
CDY23674 Canola cytosol 39.22 54.05
CDX73346 Canola cytosol 39.22 54.05
CDY35636 Canola cytosol 47.06 48.65
CDY34409 Canola cytosol 47.06 48.65
CDY25571 Canola cytosol 47.06 48.65
CDY14388 Canola cytosol 47.06 48.65
CDY49174 Canola cytosol 46.41 47.97
CDX89747 Canola cytosol 46.41 47.97
CDX96210 Canola cytosol 46.41 47.97
CDY47067 Canola cytosol 46.41 47.97
CDX71304 Canola cytosol, mitochondrion, nucleus 45.75 47.3
CDX76970 Canola cytosol 45.75 47.3
CDY51965 Canola cytosol 45.75 47.3
CDY31408 Canola cytosol 45.75 47.3
CDY02238 Canola cytosol 45.1 46.62
CDY17396 Canola cytosol 45.1 46.62
CDY68877 Canola cytosol, mitochondrion 45.75 43.75
CDY06521 Canola cytosol, plastid 45.75 43.75
CDY11958 Canola cytosol 45.75 40.46
CDY08368 Canola cytosol 41.83 40.25
CDY54342 Canola cytosol 46.41 38.59
CDY65274 Canola cytosol 36.6 38.36
CDY39315 Canola mitochondrion 37.25 37.5
CDY38761 Canola mitochondrion 36.6 36.84
CDY11654 Canola mitochondrion 36.6 36.84
CDY38184 Canola cytosol 43.14 36.67
CDY30726 Canola mitochondrion, nucleus 35.29 36.0
CDY66232 Canola mitochondrion, nucleus 35.29 36.0
CDY03040 Canola mitochondrion, nucleus 31.37 34.04
CDY06520 Canola cytosol 32.68 32.26
CDY23617 Canola plastid 38.56 32.24
CDY36778 Canola cytosol 45.1 31.8
CDY59253 Canola mitochondrion 37.91 31.69
CDX84034 Canola nucleus 21.57 30.84
CDY68969 Canola mitochondrion 28.1 29.66
CDY39254 Canola cytosol 22.22 29.31
CDX73344 Canola cytosol 31.37 29.27
CDX96859 Canola mitochondrion 35.95 29.1
Protein Annotations
EnsemblPlants:CDX88485EnsemblPlantsGene:GSBRNA2T00148033001Gene3D:3.10.110.10GO:A0A078DGX5InterPro:IPR000608InterPro:IPR016135
InterPro:UBQ-conjugat_E2InterPro:UBQ-conjugating_ASInterPro:UBQ-conjugating_enzyme/RWDMetaCyc:PWY-7511PANTHER:PTHR43902PANTHER:PTHR43902:SF4
PFAM:PF00179PFscan:PS50127ProteinID:CDX88485ProteinID:CDX88485.1ScanProsite:PS00183SMART:SM00212
SUPFAM:SSF54495UniParc:UPI0004EB42B8UniPathway:UPA00143MapMan:19.2.2.1.4::
Description
BnaC06g39290D
Coordinates
chrLK031855:+:1242282..1244366
Molecular Weight (calculated)
17208.7 Da
IEP (calculated)
7.508
GRAVY (calculated)
-0.339
Length
153 amino acids
Sequence
(BLAST)
001: MANSNLPRRI IKETQRLLSE PAPGISASPS EENMRYFNVM VLGPSQSPYE GGVFKLELFL PEEYPMSAPK VRFLTKIYHP NIDKLGRICL DILKDKWSPA
101: LQIRTVLLSI QALLSAPNPD DPLSENIAKH WKSNEAEAVE TAKEWTRLYA SGA
Best Arabidopsis Sequence Match ( AT1G16890.1 )
(BLAST)
001: MRYFNVMILG PTQSPYEGGV FKLELFLPEE YPMAAPKVRF LTKIYHPNID KLGRICLDIL KDKWSPALQI RTVLLSIQAL LSAPNPDDPL SENIAKHWKS
101: NEAEAVETAK EWTRLYASGA
Arabidopsis Description
UBC36Ubiquitin-conjugating enzyme 36 [Source:UniProtKB/TrEMBL;Acc:F4I615]
SUBAcon: [plastid,vacuole,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.