Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX76970 | Canola | cytosol | 99.32 | 99.32 |
| CDY17396 | Canola | cytosol | 98.65 | 98.65 |
| AT5G56150.1 | Thale cress | cytosol, nucleus, peroxisome | 87.84 | 87.84 |
| CDY49174 | Canola | cytosol | 86.49 | 86.49 |
| CDY47067 | Canola | cytosol | 86.49 | 86.49 |
| CDY34409 | Canola | cytosol | 86.49 | 86.49 |
| CDY25571 | Canola | cytosol | 86.49 | 86.49 |
| CDX96210 | Canola | cytosol | 86.49 | 86.49 |
| CDY35636 | Canola | cytosol | 85.81 | 85.81 |
| CDY14388 | Canola | cytosol | 85.81 | 85.81 |
| CDY68877 | Canola | cytosol, mitochondrion | 90.54 | 83.75 |
| CDY06521 | Canola | cytosol, plastid | 90.54 | 83.75 |
| CDX71304 | Canola | cytosol, mitochondrion, nucleus | 79.73 | 79.73 |
| CDY02238 | Canola | cytosol | 79.73 | 79.73 |
| CDY31408 | Canola | cytosol | 79.05 | 79.05 |
| CDX89747 | Canola | cytosol | 79.05 | 79.05 |
| CDY11958 | Canola | cytosol | 91.89 | 78.61 |
| CDY08368 | Canola | cytosol | 77.03 | 71.7 |
| CDY54342 | Canola | cytosol | 86.49 | 69.57 |
| CDY39254 | Canola | cytosol | 54.05 | 68.97 |
| CDY38184 | Canola | cytosol | 77.03 | 63.33 |
| CDY36778 | Canola | cytosol | 92.57 | 63.13 |
| CDX73346 | Canola | cytosol | 43.24 | 57.66 |
| CDY37098 | Canola | cytosol | 43.24 | 57.66 |
| CDY23674 | Canola | cytosol | 43.24 | 57.66 |
| CDY06520 | Canola | cytosol | 58.78 | 56.13 |
| CDY40025 | Canola | cytosol | 49.32 | 47.71 |
| CDY35126 | Canola | cytosol | 48.65 | 47.06 |
| CDX81788 | Canola | cytosol | 48.65 | 47.06 |
| CDY54372 | Canola | cytosol | 47.97 | 46.41 |
| CDX96802 | Canola | cytosol | 47.97 | 46.41 |
| CDX83936 | Canola | cytosol | 47.97 | 46.41 |
| CDX87428 | Canola | cytosol | 47.3 | 45.75 |
| CDX88485 | Canola | cytosol | 47.3 | 45.75 |
| CDY26882 | Canola | cytosol | 44.59 | 45.52 |
| CDY14587 | Canola | cytosol | 47.3 | 45.45 |
| CDY57941 | Canola | cytosol | 47.3 | 45.16 |
| CDY65274 | Canola | cytosol | 43.92 | 44.52 |
| CDY30726 | Canola | mitochondrion, nucleus | 41.89 | 41.33 |
| CDY66232 | Canola | mitochondrion, nucleus | 41.89 | 41.33 |
| CDX79272 | Canola | cytosol | 47.3 | 41.18 |
| CDY39315 | Canola | mitochondrion | 41.22 | 40.13 |
| CDY59253 | Canola | mitochondrion | 49.32 | 39.89 |
| CDY23617 | Canola | plastid | 49.32 | 39.89 |
| CDY38761 | Canola | mitochondrion | 40.54 | 39.47 |
| CDY11654 | Canola | mitochondrion | 40.54 | 39.47 |
| CDY03040 | Canola | mitochondrion, nucleus | 35.81 | 37.59 |
| CDX84034 | Canola | nucleus | 25.68 | 35.51 |
| CDY68969 | Canola | mitochondrion | 34.46 | 35.17 |
| CDX73344 | Canola | cytosol | 36.49 | 32.93 |
| CDX96859 | Canola | mitochondrion | 37.84 | 29.63 |
Protein Annotations
| MapMan:19.2.2.5.2 | Gene3D:3.10.110.10 | GO:A0A078ILJ6 | UniProt:A0A078ILJ6 | EnsemblPlants:CDY51965 | ProteinID:CDY51965 |
| ProteinID:CDY51965.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005524 |
| GO:GO:0016740 | EnsemblPlantsGene:GSBRNA2T00004556001 | InterPro:IPR000608 | InterPro:IPR016135 | PFAM:PF00179 | ScanProsite:PS00183 |
| PFscan:PS50127 | PANTHER:PTHR24068 | PANTHER:PTHR24068:SF117 | MetaCyc:PWY-7511 | SMART:SM00212 | SUPFAM:SSF54495 |
| InterPro:UBQ-conjugat_E2 | InterPro:UBQ-conjugating_AS | InterPro:UBQ-conjugating_enzyme/RWD | UniPathway:UPA00143 | UniParc:UPI0004EC1F75 | : |
Description
BnaCnng21490DBnaCnng21490D protein [Source:UniProtKB/TrEMBL;Acc:A0A078ILJ6]
Coordinates
chrLK033042:+:17116..18609
Molecular Weight (calculated)
16558.7 Da
IEP (calculated)
7.434
GRAVY (calculated)
-0.395
Length
148 amino acids
Sequence
(BLAST)
(BLAST)
001: MASRRINSEL RDLQKDPPLS CSAGPVGDDM YHWQATIMGP TDSPFTGGVF LVSIHFPPDY PFKPPKVSFR TKVYHPNVNS NGSICLDILK EQWSPALTIS
101: KVLLSICSLL TDPNPDDPLV PEIANIYKSD RTKYENTARS WTQKYAMG
101: KVLLSICSLL TDPNPDDPLV PEIANIYKSD RTKYENTARS WTQKYAMG
001: MASKRINKEL RDLQRDPPVS CSAGPTGDDM FQWQATIMGP ADSPFAGGVF LVTIHFPPDY PFKPPKVAFR TKVYHPNINS NGSICLDILK EQWSPALTVS
101: KVLLSICSLL TDPNPDDPLV PEIAHIYKTD RVKYESTAQS WTQKYAMG
101: KVLLSICSLL TDPNPDDPLV PEIAHIYKTD RVKYESTAQS WTQKYAMG
Arabidopsis Description
UBC30UBC30 [Source:UniProtKB/TrEMBL;Acc:A0A178UMN8]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.