Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- cytosol 2
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY37098 | Canola | cytosol | 99.1 | 99.1 |
| CDY23674 | Canola | cytosol | 97.3 | 97.3 |
| CDY65274 | Canola | cytosol | 76.58 | 58.22 |
| AT1G36340.2 | Thale cress | cytosol | 72.07 | 51.95 |
| CDY14388 | Canola | cytosol | 59.46 | 44.59 |
| CDX96210 | Canola | cytosol | 59.46 | 44.59 |
| CDY35636 | Canola | cytosol | 59.46 | 44.59 |
| CDY47067 | Canola | cytosol | 59.46 | 44.59 |
| CDY49174 | Canola | cytosol | 59.46 | 44.59 |
| CDX73344 | Canola | cytosol | 65.77 | 44.51 |
| CDX89747 | Canola | cytosol | 58.56 | 43.92 |
| CDY02238 | Canola | cytosol | 58.56 | 43.92 |
| CDY51965 | Canola | cytosol | 57.66 | 43.24 |
| CDX76970 | Canola | cytosol | 57.66 | 43.24 |
| CDY34409 | Canola | cytosol | 57.66 | 43.24 |
| CDY25571 | Canola | cytosol | 57.66 | 43.24 |
| CDY31408 | Canola | cytosol | 56.76 | 42.57 |
| CDY17396 | Canola | cytosol | 56.76 | 42.57 |
| CDX71304 | Canola | cytosol, mitochondrion, nucleus | 55.86 | 41.89 |
| CDY06521 | Canola | cytosol, plastid | 59.46 | 41.25 |
| CDY68877 | Canola | cytosol, mitochondrion | 59.46 | 41.25 |
| CDX83936 | Canola | cytosol | 54.95 | 39.87 |
| CDX81788 | Canola | cytosol | 54.95 | 39.87 |
| CDY35126 | Canola | cytosol | 54.95 | 39.87 |
| CDY54372 | Canola | cytosol | 54.95 | 39.87 |
| CDY40025 | Canola | cytosol | 54.05 | 39.22 |
| CDX87428 | Canola | cytosol | 54.05 | 39.22 |
| CDX88485 | Canola | cytosol | 54.05 | 39.22 |
| CDY14587 | Canola | cytosol | 54.05 | 38.96 |
| CDY57941 | Canola | cytosol | 54.05 | 38.71 |
| CDY26882 | Canola | cytosol | 50.45 | 38.62 |
| CDX96802 | Canola | cytosol | 53.15 | 38.56 |
| CDY11958 | Canola | cytosol | 57.66 | 36.99 |
| CDY54342 | Canola | cytosol | 59.46 | 35.87 |
| CDY08368 | Canola | cytosol | 51.35 | 35.85 |
| CDX79272 | Canola | cytosol | 53.15 | 34.71 |
| CDY38184 | Canola | cytosol | 53.15 | 32.78 |
| CDY38761 | Canola | mitochondrion | 44.14 | 32.24 |
| CDY11654 | Canola | mitochondrion | 44.14 | 32.24 |
| CDY06520 | Canola | cytosol | 44.14 | 31.61 |
| CDY30726 | Canola | mitochondrion, nucleus | 40.54 | 30.0 |
| CDY66232 | Canola | mitochondrion, nucleus | 40.54 | 30.0 |
| CDY39315 | Canola | mitochondrion | 40.54 | 29.61 |
| CDY03040 | Canola | mitochondrion, nucleus | 36.94 | 29.08 |
| CDY36778 | Canola | cytosol | 56.76 | 29.03 |
| CDY68969 | Canola | mitochondrion | 36.94 | 28.28 |
| CDY59253 | Canola | mitochondrion | 45.95 | 27.87 |
| CDY23617 | Canola | plastid | 45.95 | 27.87 |
| CDY39254 | Canola | cytosol | 24.32 | 23.28 |
| CDX84034 | Canola | nucleus | 21.62 | 22.43 |
| CDX96859 | Canola | mitochondrion | 36.94 | 21.69 |
Protein Annotations
| EnsemblPlants:CDX73346 | EnsemblPlantsGene:GSBRNA2T00106487001 | Gene3D:3.10.110.10 | GO:A0A078C8D8 | InterPro:IPR000608 | InterPro:IPR016135 |
| InterPro:UBQ-conjugat_E2 | InterPro:UBQ-conjugating_AS | InterPro:UBQ-conjugating_enzyme/RWD | MetaCyc:PWY-7511 | PANTHER:PTHR24068 | PANTHER:PTHR24068:SF74 |
| PFAM:PF00179 | PFscan:PS50127 | ProteinID:CDX73346 | ProteinID:CDX73346.1 | ScanProsite:PS00183 | SMART:SM00212 |
| SUPFAM:SSF54495 | UniParc:UPI0004EED84D | UniPathway:UPA00143 | MapMan:35.1 | : | : |
Description
BnaC05g27600D
Coordinates
chrLK031798:+:1975141..1975834
Molecular Weight (calculated)
12555.0 Da
IEP (calculated)
6.519
GRAVY (calculated)
-0.341
Length
111 amino acids
Sequence
(BLAST)
(BLAST)
001: MIQGPEGTPY AGGMFSIDIK FPKNYPFTAP KFAFKTRIYH PNINSEGSIC LDILKDKWSP PLTVEKVLLS ITSLLADPNP DDPLVGEIGE LFKSNNFLFN
101: QRAREWTERH A
101: QRAREWTERH A
001: MFKKMDKKAA QRIAMEYRAM ISKESLFSIG QNSNNIYEWT AVIRGPDGTP YEGGMFNLSI KFPTDYPFKP PKFTFKTPIY HPNINDEGSI CMNILKDKWT
101: PALMVEKVLL SILLLLEKPN PDDPLVPEIG QLFKNNRFQF DQRAREFTAR HANN
101: PALMVEKVLL SILLLLEKPN PDDPLVPEIG QLFKNNRFQF DQRAREFTAR HANN
Arabidopsis Description
UBC31Probable ubiquitin-conjugating enzyme E2 31 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8X7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.