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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 2
  • cytosol 4
  • nucleus 1
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:plastid
EpiLoc:cytosol
iPSORT:plastid
MultiLoc:cytosol
Plant-mPloc:cytosol, nucleus
PProwler:mitochondrion
WoLF PSORT:mitochondrion
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc10g007260.2.1 Tomato plastid 100.0 100.0
CDY35126 Canola cytosol 100.0 100.0
CDY54372 Canola cytosol 99.35 99.35
TraesCS3A01G271800.1 Wheat cytosol 99.35 99.35
TraesCS3B01G305500.1 Wheat mitochondrion 99.35 99.35
TraesCS3D01G271400.1 Wheat cytosol 99.35 99.35
PGSC0003DMT400054795 Potato cytosol 99.35 99.35
PGSC0003DMT400032251 Potato cytosol 99.35 99.35
KRH55097 Soybean endoplasmic reticulum 99.35 99.35
CDX83936 Canola cytosol 99.35 99.35
KRH26227 Soybean cytosol 99.35 99.35
KRH21984 Soybean endoplasmic reticulum, nucleus 99.35 99.35
CDY40025 Canola cytosol 99.35 99.35
CDX87428 Canola cytosol 98.69 98.69
CDX96802 Canola cytosol 98.69 98.69
Solyc07g062570.2.1 Tomato plastid 98.69 98.69
CDY26882 Canola cytosol 93.46 98.62
CDX88485 Canola cytosol 98.04 98.04
Os01t0673600-01 Rice extracellular, plasma membrane, plastid 98.04 98.04
CDY14587 Canola cytosol 98.04 97.4
EES03421 Sorghum cytosol 97.39 97.39
TraesCS1D01G400600.1 Wheat cytosol 97.39 97.39
TraesCS1A01G392400.1 Wheat cytosol 97.39 97.39
KXG35379 Sorghum cytosol 95.42 95.42
CDY57941 Canola cytosol 96.08 94.84
Zm00001d009552_P002 Maize cytosol 98.04 94.34
TraesCS5A01G181700.1 Wheat cytosol 94.12 94.12
TraesCS5B01G179700.1 Wheat cytosol 94.12 94.12
TraesCS5D01G186100.1 Wheat cytosol 94.12 94.12
AT1G16890.3 Thale cress cytosol 99.35 93.83
HORVU5Hr1G055360.2 Barley cytosol, mitochondrion 94.12 92.9
GSMUA_Achr4P31050_001 Banana cytosol 45.75 92.11
Zm00001d038995_P001 Maize cytosol 98.04 92.02
HORVU1Hr1G086460.1 Barley endoplasmic reticulum, extracellular 54.9 88.42
VIT_19s0014g01460.t01 Wine grape cytosol 89.54 88.39
Zm00001d043905_P003 Maize cytosol 97.39 88.17
CDX79272 Canola cytosol 96.08 86.47
HORVU1Hr1G086610.1 Barley cytosol, plastid 97.39 85.63
HORVU1Hr1G086480.1 Barley mitochondrion 94.77 75.52
HORVU3Hr1G061790.1 Barley cytosol 99.35 74.88
Zm00001d011565_P002 Maize cytosol, mitochondrion 96.73 74.37
KRH27335 Soybean endoplasmic reticulum 73.2 74.17
TraesCS1B01G420600.1 Wheat vacuole 84.31 62.93
CDY37098 Canola cytosol 39.87 54.95
CDX73346 Canola cytosol 39.87 54.95
CDY23674 Canola cytosol 39.87 54.95
CDY49174 Canola cytosol 47.71 49.32
CDX96210 Canola cytosol 47.71 49.32
CDY47067 Canola cytosol 47.71 49.32
CDX76970 Canola cytosol 47.06 48.65
CDX89747 Canola cytosol 47.06 48.65
CDY14388 Canola cytosol 47.06 48.65
CDY51965 Canola cytosol 47.06 48.65
CDY25571 Canola cytosol 47.06 48.65
CDY34409 Canola cytosol 47.06 48.65
CDY35636 Canola cytosol 47.06 48.65
CDX71304 Canola cytosol, mitochondrion, nucleus 46.41 47.97
CDY17396 Canola cytosol 46.41 47.97
CDY31408 Canola cytosol 46.41 47.97
CDY02238 Canola cytosol 45.75 47.3
CDY68877 Canola cytosol, mitochondrion 45.75 43.75
CDY06521 Canola cytosol, plastid 45.75 43.75
CDY11958 Canola cytosol 47.06 41.62
CDY08368 Canola cytosol 41.83 40.25
CDY54342 Canola cytosol 47.71 39.67
CDY65274 Canola cytosol 37.25 39.04
CDY39315 Canola mitochondrion 37.91 38.16
CDY11654 Canola mitochondrion 37.25 37.5
CDY38761 Canola mitochondrion 37.25 37.5
CDY30726 Canola mitochondrion, nucleus 35.95 36.67
CDY38184 Canola cytosol 43.14 36.67
CDY66232 Canola mitochondrion, nucleus 35.95 36.67
CDY03040 Canola mitochondrion, nucleus 32.03 34.75
CDY06520 Canola cytosol 33.33 32.9
CDY36778 Canola cytosol 46.41 32.72
CDY23617 Canola plastid 38.56 32.24
CDX84034 Canola nucleus 22.22 31.78
CDY59253 Canola mitochondrion 37.91 31.69
CDY68969 Canola mitochondrion 28.1 29.66
CDX96859 Canola mitochondrion 36.6 29.63
CDY39254 Canola cytosol 22.22 29.31
CDX73344 Canola cytosol 31.37 29.27
Protein Annotations
MapMan:19.2.2.1.4Gene3D:3.10.110.10GO:A0A078HBK8UniProt:A0A078HBK8EnsemblPlants:CDX81788ProteinID:CDX81788
ProteinID:CDX81788.1ProteinID:CDY35126.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0005524GO:GO:0016740EnsemblPlantsGene:GSBRNA2T00136728001InterPro:IPR000608InterPro:IPR016135PFAM:PF00179
ScanProsite:PS00183PFscan:PS50127PANTHER:PTHR43902PANTHER:PTHR43902:SF4MetaCyc:PWY-7511SMART:SM00212
SUPFAM:SSF54495InterPro:UBQ-conjugat_E2InterPro:UBQ-conjugating_ASInterPro:UBQ-conjugating_enzyme/RWDUniPathway:UPA00143UniParc:UPI000009F139
Description
BnaC08g38130DBnaA06g11360D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HBK8]
Coordinates
chrLK031826:-:785710..787683
Molecular Weight (calculated)
17220.8 Da
IEP (calculated)
7.508
GRAVY (calculated)
-0.319
Length
153 amino acids
Sequence
(BLAST)
001: MANSNLPRRI IKETQRLLSE PAPGISASPS EENMRYFNVM ILGPTQSPYE GGVFKLELFL PEEYPMAAPK VRFLTKIYHP NIDKLGRICL DILKDKWSPA
101: LQIRTVLLSI QALLSAPNPD DPLSENIAKH WKSNEAEAVE TAKEWTRLYA SGA
Best Arabidopsis Sequence Match ( AT1G16890.2 )
(BLAST)
001: MANSNLPRRI IKETQRLLSE PAPGISASPS EENMRYFNVM ILGPTQSPYE GGVFKLELFL PEEYPMAAPK VRFLTKIYHP NIDKLGRICL DILKDKWSPA
101: LQIRTVLLSI QALLSAPNPD DPLSENIAKH WKSNEAEAVE TAKEWTRLYA SGA
Arabidopsis Description
UBC36Ubiquitin-conjugating enzyme 36 [Source:UniProtKB/TrEMBL;Acc:F4I615]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.