Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX71304 | Canola | cytosol, mitochondrion, nucleus | 99.32 | 99.32 |
| AT2G16740.1 | Thale cress | cytosol | 91.22 | 91.22 |
| CDX89747 | Canola | cytosol | 87.84 | 87.84 |
| CDY02238 | Canola | cytosol | 87.16 | 87.16 |
| KRH24311 | Soybean | cytosol | 85.81 | 85.81 |
| KRH29288 | Soybean | cytosol | 85.81 | 85.81 |
| PGSC0003DMT400009229 | Potato | nucleus | 84.46 | 84.46 |
| Os02t0120600-01 | Rice | cytosol | 84.46 | 84.46 |
| VIT_03s0038g02390.t01 | Wine grape | cytosol | 84.46 | 84.46 |
| Solyc02g083570.2.1 | Tomato | cytosol | 83.78 | 83.78 |
| CDY35636 | Canola | cytosol | 83.11 | 83.11 |
| CDY47067 | Canola | cytosol | 83.11 | 83.11 |
| CDY49174 | Canola | cytosol | 83.11 | 83.11 |
| CDY14388 | Canola | cytosol | 83.11 | 83.11 |
| CDX96210 | Canola | cytosol | 83.11 | 83.11 |
| PGSC0003DMT400058107 | Potato | cytosol, mitochondrion | 82.43 | 82.43 |
| Solyc03g033410.2.1 | Tomato | cytosol, mitochondrion | 82.43 | 82.43 |
| TraesCS6A01G071100.1 | Wheat | cytosol | 82.43 | 81.88 |
| TraesCS6B01G095200.1 | Wheat | cytosol | 82.43 | 81.88 |
| TraesCS6D01G069000.1 | Wheat | cytosol | 82.43 | 81.88 |
| CDY34409 | Canola | cytosol | 81.76 | 81.76 |
| CDY25571 | Canola | cytosol | 81.76 | 81.76 |
| GSMUA_Achr3P26650_001 | Banana | cytosol, mitochondrion, peroxisome | 81.76 | 81.76 |
| KXG29317 | Sorghum | nucleus | 81.76 | 81.76 |
| Zm00001d053897_P001 | Maize | mitochondrion | 81.08 | 81.08 |
| Bra001995.1-P | Field mustard | cytosol | 97.97 | 80.56 |
| GSMUA_Achr7P17820_001 | Banana | cytosol | 80.41 | 80.41 |
| CDY17396 | Canola | cytosol | 79.05 | 79.05 |
| CDY51965 | Canola | cytosol | 79.05 | 79.05 |
| CDX76970 | Canola | cytosol | 78.38 | 78.38 |
| CDY68877 | Canola | cytosol, mitochondrion | 80.41 | 74.38 |
| CDY06521 | Canola | cytosol, plastid | 80.41 | 74.38 |
| CDY11958 | Canola | cytosol | 81.08 | 69.36 |
| CDY08368 | Canola | cytosol | 73.65 | 68.55 |
| CDY54342 | Canola | cytosol | 83.11 | 66.85 |
| CDY39254 | Canola | cytosol | 49.32 | 62.93 |
| CDY38184 | Canola | cytosol | 72.3 | 59.44 |
| CDY23674 | Canola | cytosol | 43.24 | 57.66 |
| CDY37098 | Canola | cytosol | 42.57 | 56.76 |
| CDX73346 | Canola | cytosol | 42.57 | 56.76 |
| CDY36778 | Canola | cytosol | 80.41 | 54.84 |
| CDY06520 | Canola | cytosol | 52.7 | 50.32 |
| CDY40025 | Canola | cytosol | 48.65 | 47.06 |
| CDX81788 | Canola | cytosol | 47.97 | 46.41 |
| CDX83936 | Canola | cytosol | 47.97 | 46.41 |
| CDY35126 | Canola | cytosol | 47.97 | 46.41 |
| CDY54372 | Canola | cytosol | 47.97 | 46.41 |
| CDX87428 | Canola | cytosol | 47.3 | 45.75 |
| CDX96802 | Canola | cytosol | 47.3 | 45.75 |
| CDX88485 | Canola | cytosol | 47.3 | 45.75 |
| CDY14587 | Canola | cytosol | 47.3 | 45.45 |
| CDY65274 | Canola | cytosol | 44.59 | 45.21 |
| CDY26882 | Canola | cytosol | 43.92 | 44.83 |
| CDY57941 | Canola | cytosol | 45.95 | 43.87 |
| CDY66232 | Canola | mitochondrion, nucleus | 41.22 | 40.67 |
| CDY30726 | Canola | mitochondrion, nucleus | 41.22 | 40.67 |
| CDY38761 | Canola | mitochondrion | 41.22 | 40.13 |
| CDY11654 | Canola | mitochondrion | 41.22 | 40.13 |
| CDX79272 | Canola | cytosol | 45.95 | 40.0 |
| CDY39315 | Canola | mitochondrion | 40.54 | 39.47 |
| CDY59253 | Canola | mitochondrion | 47.3 | 38.25 |
| CDY23617 | Canola | plastid | 47.3 | 38.25 |
| CDY03040 | Canola | mitochondrion, nucleus | 35.14 | 36.88 |
| CDY68969 | Canola | mitochondrion | 33.11 | 33.79 |
| CDX84034 | Canola | nucleus | 24.32 | 33.64 |
| CDX73344 | Canola | cytosol | 35.81 | 32.32 |
| CDX96859 | Canola | mitochondrion | 37.84 | 29.63 |
Protein Annotations
| MapMan:19.2.2.5.2 | Gene3D:3.10.110.10 | GO:A0A078H3J2 | UniProt:A0A078H3J2 | EnsemblPlants:CDY31408 | ProteinID:CDY31408 |
| ProteinID:CDY31408.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005524 |
| GO:GO:0016740 | EnsemblPlantsGene:GSBRNA2T00047629001 | InterPro:IPR000608 | InterPro:IPR016135 | PFAM:PF00179 | ScanProsite:PS00183 |
| PFscan:PS50127 | PANTHER:PTHR24068 | PANTHER:PTHR24068:SF47 | MetaCyc:PWY-7511 | SMART:SM00212 | SUPFAM:SSF54495 |
| InterPro:UBQ-conjugat_E2 | InterPro:UBQ-conjugating_AS | InterPro:UBQ-conjugating_enzyme/RWD | UniPathway:UPA00143 | UniParc:UPI0004EE9434 | SEG:seg |
Description
BnaA07g03430DBnaA07g03430D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H3J2]
Coordinates
chrLK032271:-:392923..394288
Molecular Weight (calculated)
16701.2 Da
IEP (calculated)
7.946
GRAVY (calculated)
-0.254
Length
148 amino acids
Sequence
(BLAST)
(BLAST)
001: MATRRILKEL RELQRDPPMS CSAGPVGEDM FHWQATIMGP NESPYTGGVF LVTINFSQDY PFKPPKVVFK TKVFHPNINS NGNICLDILK DQWSPALTIS
101: KVLLSVCSLL TDPNPDDPLV PEIAHICKTD KAKYEAMARS WTQKYALY
101: KVLLSVCSLL TDPNPDDPLV PEIAHICKTD KAKYEAMARS WTQKYALY
001: MATRRILKEL KELQRDPPVS CSAGPTGEDM FHWQATIMGP NESPYSGGVF LVNIHFPPDY PFKPPKVVFR TKVFHPNINS NGNICLDILK DQWSPALTIS
101: KVLLSICSLL TDPNPDDPLV PEIAHIYKTD KTKYEAMARS WTQKYALF
101: KVLLSICSLL TDPNPDDPLV PEIAHIYKTD KTKYEAMARS WTQKYALF
Arabidopsis Description
UBC29UBC29 [Source:UniProtKB/TrEMBL;Acc:A0A178VQZ9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.