Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX71304 | Canola | cytosol, mitochondrion, nucleus | 91.89 | 91.89 |
| CDY31408 | Canola | cytosol | 91.22 | 91.22 |
| KRH24311 | Soybean | cytosol | 87.84 | 87.84 |
| KRH29288 | Soybean | cytosol | 87.84 | 87.84 |
| AT5G53300.1 | Thale cress | cytosol, nucleus, peroxisome | 87.16 | 87.16 |
| PGSC0003DMT400009229 | Potato | nucleus | 87.16 | 87.16 |
| VIT_03s0038g02390.t01 | Wine grape | cytosol | 87.16 | 87.16 |
| Solyc02g083570.2.1 | Tomato | cytosol | 86.49 | 86.49 |
| Os02t0120600-01 | Rice | cytosol | 85.81 | 85.81 |
| CDX89747 | Canola | cytosol | 85.81 | 85.81 |
| AT5G41700.4 | Thale cress | cytosol, mitochondrion, peroxisome | 85.81 | 85.23 |
| Bra013049.1-P | Field mustard | cytosol | 85.14 | 85.14 |
| CDY02238 | Canola | cytosol | 85.14 | 85.14 |
| GSMUA_Achr3P26650_001 | Banana | cytosol, mitochondrion, peroxisome | 85.14 | 85.14 |
| AT3G08690.1 | Thale cress | cytosol | 84.46 | 84.46 |
| TraesCS6A01G071100.1 | Wheat | cytosol | 84.46 | 83.89 |
| TraesCS6B01G095200.1 | Wheat | cytosol | 84.46 | 83.89 |
| TraesCS6D01G069000.1 | Wheat | cytosol | 84.46 | 83.89 |
| PGSC0003DMT400058107 | Potato | cytosol, mitochondrion | 83.78 | 83.78 |
| Solyc03g033410.2.1 | Tomato | cytosol, mitochondrion | 83.78 | 83.78 |
| AT5G56150.1 | Thale cress | cytosol, nucleus, peroxisome | 83.78 | 83.78 |
| Zm00001d053897_P001 | Maize | mitochondrion | 81.76 | 81.76 |
| KXG29317 | Sorghum | nucleus | 81.76 | 81.76 |
| GSMUA_Achr7P17820_001 | Banana | cytosol | 81.08 | 81.08 |
| Bra001995.1-P | Field mustard | cytosol | 89.19 | 73.33 |
| AT3G08700.1 | Thale cress | cytosol | 73.65 | 73.15 |
| AT4G27960.2 | Thale cress | endoplasmic reticulum, golgi | 86.49 | 71.91 |
| AT1G64230.5 | Thale cress | cytosol | 83.78 | 65.26 |
| AT1G78870.2 | Thale cress | cytosol | 47.97 | 46.41 |
| AT1G16890.3 | Thale cress | cytosol | 48.65 | 44.44 |
| AT1G36340.2 | Thale cress | cytosol | 45.95 | 44.16 |
| AT5G62540.1 | Thale cress | nucleus | 43.24 | 42.67 |
| AT1G14400.1 | Thale cress | mitochondrion, nucleus | 41.89 | 40.79 |
| AT2G02760.2 | Thale cress | mitochondrion, nucleus | 41.22 | 40.13 |
| AT3G13550.1 | Thale cress | mitochondrion | 48.65 | 39.56 |
Protein Annotations
| MapMan:19.2.2.5.2 | Gene3D:3.10.110.10 | EntrezGene:816175 | UniProt:A0A178VQZ9 | ProteinID:AAD24607.1 | ProteinID:AEC06533.1 |
| ArrayExpress:AT2G16740 | EnsemblPlantsGene:AT2G16740 | RefSeq:AT2G16740 | TAIR:AT2G16740 | RefSeq:AT2G16740-TAIR-G | EnsemblPlants:AT2G16740.1 |
| TAIR:AT2G16740.1 | EMBL:AY063872 | EMBL:AY086787 | EMBL:AY091232 | EMBL:DQ027042 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004842 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006464 |
| GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016567 |
| GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR000608 | InterPro:IPR016135 | RefSeq:NP_565391.1 | ProteinID:OAP08198.1 |
| PFAM:PF00179 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | ScanProsite:PS00183 | PFscan:PS50127 | PANTHER:PTHR24068 | PANTHER:PTHR24068:SF47 | UniProt:Q9SLE4 |
| SMART:SM00212 | SUPFAM:SSF54495 | Symbol:UBC29 | InterPro:UBQ-conjugat_E2 | InterPro:UBQ-conjugating_AS | InterPro:UBQ-conjugating_enzyme/RWD |
| UniParc:UPI000009C6CF | : | : | : | : | : |
Description
UBC29UBC29 [Source:UniProtKB/TrEMBL;Acc:A0A178VQZ9]
Coordinates
chr2:+:7267722..7269055
Molecular Weight (calculated)
16760.2 Da
IEP (calculated)
8.069
GRAVY (calculated)
-0.295
Length
148 amino acids
Sequence
(BLAST)
(BLAST)
001: MATRRILKEL KELQRDPPVS CSAGPTGEDM FHWQATIMGP NESPYSGGVF LVNIHFPPDY PFKPPKVVFR TKVFHPNINS NGNICLDILK DQWSPALTIS
101: KVLLSICSLL TDPNPDDPLV PEIAHIYKTD KTKYEAMARS WTQKYALF
101: KVLLSICSLL TDPNPDDPLV PEIAHIYKTD KTKYEAMARS WTQKYALF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.