Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH21984 | Soybean | endoplasmic reticulum, nucleus | 99.35 | 99.35 |
| Solyc07g062570.2.1 | Tomato | plastid | 98.69 | 98.69 |
| Solyc10g007260.2.1 | Tomato | plastid | 98.69 | 98.69 |
| KRH55097 | Soybean | endoplasmic reticulum | 98.04 | 98.04 |
| KRH26227 | Soybean | cytosol | 98.04 | 98.04 |
| PGSC0003DMT400032251 | Potato | cytosol | 98.04 | 98.04 |
| PGSC0003DMT400054795 | Potato | cytosol | 98.04 | 98.04 |
| TraesCS3A01G271800.1 | Wheat | cytosol | 98.04 | 98.04 |
| TraesCS3B01G305500.1 | Wheat | mitochondrion | 98.04 | 98.04 |
| TraesCS3D01G271400.1 | Wheat | cytosol | 98.04 | 98.04 |
| CDX87428 | Canola | cytosol | 97.39 | 97.39 |
| CDY26882 | Canola | cytosol | 92.16 | 97.24 |
| Bra035071.1-P | Field mustard | cytosol | 88.24 | 97.12 |
| Bra008383.1-P | Field mustard | cytosol | 96.73 | 96.73 |
| Os01t0673600-01 | Rice | extracellular, plasma membrane, plastid | 96.73 | 96.73 |
| CDX88485 | Canola | cytosol | 96.73 | 96.73 |
| CDY14587 | Canola | cytosol | 96.73 | 96.1 |
| TraesCS1D01G400600.1 | Wheat | cytosol | 96.08 | 96.08 |
| TraesCS1A01G392400.1 | Wheat | cytosol | 96.08 | 96.08 |
| EES03421 | Sorghum | cytosol | 96.08 | 96.08 |
| CDY57941 | Canola | cytosol | 96.08 | 94.84 |
| KXG35379 | Sorghum | cytosol | 94.12 | 94.12 |
| Zm00001d009552_P002 | Maize | cytosol | 96.73 | 93.08 |
| TraesCS5A01G181700.1 | Wheat | cytosol | 92.81 | 92.81 |
| TraesCS5D01G186100.1 | Wheat | cytosol | 92.81 | 92.81 |
| TraesCS5B01G179700.1 | Wheat | cytosol | 92.81 | 92.81 |
| AT1G16890.3 | Thale cress | cytosol | 98.04 | 92.59 |
| HORVU5Hr1G055360.2 | Barley | cytosol, mitochondrion | 92.81 | 91.61 |
| Zm00001d038995_P001 | Maize | cytosol | 96.73 | 90.8 |
| GSMUA_Achr4P31050_001 | Banana | cytosol | 45.1 | 90.79 |
| VIT_19s0014g01460.t01 | Wine grape | cytosol | 90.2 | 89.03 |
| HORVU1Hr1G086460.1 | Barley | endoplasmic reticulum, extracellular | 54.25 | 87.37 |
| Zm00001d043905_P003 | Maize | cytosol | 96.08 | 86.98 |
| CDX79272 | Canola | cytosol | 96.08 | 86.47 |
| HORVU1Hr1G086610.1 | Barley | cytosol, plastid | 96.08 | 84.48 |
| KRH27335 | Soybean | endoplasmic reticulum | 73.86 | 74.83 |
| HORVU1Hr1G086480.1 | Barley | mitochondrion | 93.46 | 74.48 |
| HORVU3Hr1G061790.1 | Barley | cytosol | 98.04 | 73.89 |
| Zm00001d011565_P002 | Maize | cytosol, mitochondrion | 95.42 | 73.37 |
| TraesCS1B01G420600.1 | Wheat | vacuole | 83.01 | 61.95 |
| AT3G08690.1 | Thale cress | cytosol | 47.06 | 48.65 |
| AT5G56150.1 | Thale cress | cytosol, nucleus, peroxisome | 46.41 | 47.97 |
| AT5G53300.1 | Thale cress | cytosol, nucleus, peroxisome | 46.41 | 47.97 |
| AT2G16740.1 | Thale cress | cytosol | 46.41 | 47.97 |
| AT5G41700.4 | Thale cress | cytosol, mitochondrion, peroxisome | 45.75 | 46.98 |
| AT3G08700.1 | Thale cress | cytosol | 44.44 | 45.64 |
| AT1G36340.2 | Thale cress | cytosol | 40.52 | 40.26 |
| AT4G27960.2 | Thale cress | endoplasmic reticulum, golgi | 46.41 | 39.89 |
| AT5G62540.1 | Thale cress | nucleus | 36.6 | 37.33 |
| AT2G02760.2 | Thale cress | mitochondrion, nucleus | 36.6 | 36.84 |
| AT1G14400.1 | Thale cress | mitochondrion, nucleus | 36.6 | 36.84 |
| AT1G64230.5 | Thale cress | cytosol | 45.1 | 36.32 |
| AT3G13550.1 | Thale cress | mitochondrion | 37.25 | 31.32 |
Protein Annotations
| MapMan:19.2.2.1.4 | Gene3D:3.10.110.10 | EntrezGene:844224 | UniProt:A0A178WFI9 | ProteinID:AAC83026.1 | ProteinID:AEE36165.1 |
| ProteinID:AEE36166.1 | ProteinID:ANM59244.1 | ArrayExpress:AT1G78870 | EnsemblPlantsGene:AT1G78870 | RefSeq:AT1G78870 | TAIR:AT1G78870 |
| RefSeq:AT1G78870-TAIR-G | EnsemblPlants:AT1G78870.2 | TAIR:AT1G78870.2 | EMBL:AY049261 | EMBL:AY085854 | EMBL:BT000544 |
| EMBL:DQ027048 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004842 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005737 | GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006301 | GO:GO:0006464 | GO:GO:0006511 |
| GO:GO:0006950 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009653 |
| GO:GO:0009987 | GO:GO:0010039 | GO:GO:0010053 | GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 |
| GO:GO:0030154 | GO:GO:0031625 | GO:GO:0046686 | GO:GO:0061630 | GO:GO:0070534 | InterPro:IPR000608 |
| InterPro:IPR016135 | RefSeq:NP_001031298.1 | RefSeq:NP_001321618.1 | RefSeq:NP_565192.1 | ProteinID:OAP17140.1 | PFAM:PF00179 |
| PO:PO:0000005 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0025195 | PO:PO:0025281 |
| ScanProsite:PS00183 | PFscan:PS50127 | PANTHER:PTHR43902 | PANTHER:PTHR43902:SF4 | UniProt:Q94A97 | SMART:SM00212 |
| SUPFAM:SSF54495 | Symbol:UBC35 | InterPro:UBQ-conjugat_E2 | InterPro:UBQ-conjugating_AS | InterPro:UBQ-conjugating_enzyme/RWD | UniParc:UPI00000AC235 |
Description
UBC35UBC35 [Source:UniProtKB/TrEMBL;Acc:A0A178WFI9]
Coordinates
chr1:+:29650376..29652611
Molecular Weight (calculated)
17192.7 Da
IEP (calculated)
7.508
GRAVY (calculated)
-0.319
Length
153 amino acids
Sequence
(BLAST)
(BLAST)
001: MANSNLPRRI IKETQRLLSE PAPGISASPS EDNMRYFNVM ILGPTQSPYE GGVFKLELFL PEEYPMAAPK VRFLTKIYHP NIDKLGRICL DILKDKWSPA
101: LQIRTVLLSI QALLSAPNPD DPLSENIAKH WKSNEAEAVD TAKEWTRLYA SGA
101: LQIRTVLLSI QALLSAPNPD DPLSENIAKH WKSNEAEAVD TAKEWTRLYA SGA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.