Factsheet for Bra035071.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 4
nucleus 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX87428	Canola	cytosol	100.0	90.85
Bra026700.1-P	Field mustard	cytosol	99.28	90.2
Bra008383.1-P	Field mustard	cytosol	99.28	90.2
Bra016626.1-P	Field mustard	cytosol	99.28	90.2
Bra026018.1-P	Field mustard	cytosol	98.56	89.54
Solyc10g007260.2.1	Tomato	plastid	98.56	89.54
TraesCS3A01G271800.1	Wheat	cytosol	98.56	89.54
TraesCS3B01G305500.1	Wheat	mitochondrion	98.56	89.54
TraesCS3D01G271400.1	Wheat	cytosol	98.56	89.54
GSMUA_Achr4P31050_001	Banana	cytosol	48.92	89.47
KRH21984	Soybean	endoplasmic reticulum, nucleus	97.84	88.89
TraesCS1D01G400600.1	Wheat	cytosol	97.84	88.89
TraesCS1A01G392400.1	Wheat	cytosol	97.84	88.89
KRH26227	Soybean	cytosol	97.84	88.89
KRH55097	Soybean	endoplasmic reticulum	97.84	88.89
PGSC0003DMT400032251	Potato	cytosol	97.84	88.89
PGSC0003DMT400054795	Potato	cytosol	97.84	88.89
AT1G78870.2	Thale cress	cytosol	97.12	88.24
Os01t0673600-01	Rice	extracellular, plasma membrane, plastid	97.12	88.24
Solyc07g062570.2.1	Tomato	plastid	97.12	88.24
EES03421	Sorghum	cytosol	96.4	87.58
KXG35379	Sorghum	cytosol	94.96	86.27
Zm00001d009552_P002	Maize	cytosol	97.12	84.91
TraesCS5D01G186100.1	Wheat	cytosol	92.09	83.66
TraesCS5B01G179700.1	Wheat	cytosol	92.09	83.66
TraesCS5A01G181700.1	Wheat	cytosol	92.09	83.66
Zm00001d038995_P001	Maize	cytosol	97.12	82.82
HORVU5Hr1G055360.2	Barley	cytosol, mitochondrion	92.09	82.58
Zm00001d043905_P003	Maize	cytosol	96.4	79.29
HORVU1Hr1G086610.1	Barley	cytosol, plastid	97.84	78.16
VIT_19s0014g01460.t01	Wine grape	cytosol	87.05	78.06
HORVU1Hr1G086460.1	Barley	endoplasmic reticulum, extracellular	50.36	73.68
HORVU1Hr1G086480.1	Barley	mitochondrion	94.96	68.75
HORVU3Hr1G061790.1	Barley	cytosol	98.56	67.49
Zm00001d011565_P002	Maize	cytosol, mitochondrion	95.68	66.83
KRH27335	Soybean	endoplasmic reticulum	69.06	63.58
TraesCS1B01G420600.1	Wheat	vacuole	83.45	56.59
Bra027688.1-P	Field mustard	cytosol	38.85	48.65
Bra003066.1-P	Field mustard	cytosol	46.04	43.24
Bra041101.1-P	Field mustard	cytosol	45.32	42.57
Bra022645.1-P	Field mustard	cytosol	45.32	42.57
Bra029076.1-P	Field mustard	cytosol	45.32	42.57
Bra001347.1-P	Field mustard	cytosol	45.32	42.57
Bra013049.1-P	Field mustard	cytosol	44.6	41.89
Bra002842.1-P	Field mustard	cytosol	43.88	41.22
Bra035605.1-P	Field mustard	cytosol	43.88	41.22
Bra032244.1-P	Field mustard	cytosol	42.45	39.33
Bra028946.1-P	Field mustard	cytosol	38.85	38.57
Bra027749.1-P	Field mustard	nucleus	40.29	36.84
Bra001995.1-P	Field mustard	cytosol	43.88	33.89
Bra026222.1-P	Field mustard	mitochondrion, nucleus	35.25	32.24
Bra017410.1-P	Field mustard	mitochondrion, nucleus	35.25	32.24
Bra016264.1-P	Field mustard	mitochondrion	35.25	32.24
Bra024808.1-P	Field mustard	mitochondrion, nucleus	34.53	31.58
Bra026582.1-P	Field mustard	mitochondrion, nucleus	34.53	31.58
Bra026833.1-P	Field mustard	mitochondrion, nucleus	34.53	31.58
Bra029252.1-P	Field mustard	mitochondrion, nucleus	33.81	31.33
Bra016704.1-P	Field mustard	nucleus	33.09	30.26
Bra027422.1-P	Field mustard	plastid	35.97	27.32
Bra016703.1-P	Field mustard	nucleus	34.53	22.86
Bra029711.1-P	Field mustard	nucleus	43.88	19.68

Protein Annotations

EnsemblPlants:Bra035071.1	EnsemblPlants:Bra035071.1-P	EnsemblPlantsGene:Bra035071	Gene3D:3.10.110.10	InterPro:IPR000608	InterPro:IPR016135
InterPro:UBQ-conjugat_E2	InterPro:UBQ-conjugating_enzyme/RWD	PANTHER:PTHR43902	PANTHER:PTHR43902:SF4	PFAM:PF00179	PFscan:PS50127
SMART:SM00212	SUPFAM:SSF54495	UniParc:UPI0002541C6A	UniProt:M4F1X4	MapMan:19.2.2.1.4	:

Description

AT1G16890 (E=2e-036) UBC36, UBC13B | ubiquitin-conjugating enzyme, putative

Coordinates

chrA07:+:22029513..22031075

Molecular Weight (calculated)

15466.6 Da

IEP (calculated)

5.249

GRAVY (calculated)

-0.309

Length

139 amino acids

Sequence
(BLAST)

001: MANSNLPRRI IKETQRLLSE PAPGISASPS EENMRYFNVM VLGPSQSPYE GGVFKLELFL PEEYPMAAPK LGRICLDILK DKWSPALQIR TVLLSIQALL
101: SAPNPDDPLS ENIAKHWKSN EAEAVETAKE WTRLYASGA

Best Arabidopsis Sequence Match ( AT1G16890.2 )
(BLAST)

001: MANSNLPRRI IKETQRLLSE PAPGISASPS EENMRYFNVM ILGPTQSPYE GGVFKLELFL PEEYPMAAPK VRFLTKIYHP NIDKLGRICL DILKDKWSPA
101: LQIRTVLLSI QALLSAPNPD DPLSENIAKH WKSNEAEAVE TAKEWTRLYA SGA

Arabidopsis Description

UBC36Ubiquitin-conjugating enzyme 36 [Source:UniProtKB/TrEMBL;Acc:F4I615]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.