Factsheet for Bra026700.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 4
nucleus 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY54372	Canola	cytosol	100.0	100.0
Solyc10g007260.2.1	Tomato	plastid	99.35	99.35
Bra026018.1-P	Field mustard	cytosol	99.35	99.35
TraesCS3A01G271800.1	Wheat	cytosol	99.35	99.35
TraesCS3B01G305500.1	Wheat	mitochondrion	99.35	99.35
TraesCS3D01G271400.1	Wheat	cytosol	99.35	99.35
Bra035071.1-P	Field mustard	cytosol	90.2	99.28
Bra016626.1-P	Field mustard	cytosol	98.69	98.69
Bra008383.1-P	Field mustard	cytosol	98.69	98.69
KRH21984	Soybean	endoplasmic reticulum, nucleus	98.69	98.69
KRH26227	Soybean	cytosol	98.69	98.69
PGSC0003DMT400054795	Potato	cytosol	98.69	98.69
PGSC0003DMT400032251	Potato	cytosol	98.69	98.69
KRH55097	Soybean	endoplasmic reticulum	98.69	98.69
Solyc07g062570.2.1	Tomato	plastid	98.04	98.04
Os01t0673600-01	Rice	extracellular, plasma membrane, plastid	98.04	98.04
EES03421	Sorghum	cytosol	97.39	97.39
TraesCS1D01G400600.1	Wheat	cytosol	97.39	97.39
TraesCS1A01G392400.1	Wheat	cytosol	97.39	97.39
KXG35379	Sorghum	cytosol	96.08	96.08
Zm00001d009552_P002	Maize	cytosol	98.04	94.34
TraesCS5A01G181700.1	Wheat	cytosol	93.46	93.46
TraesCS5D01G186100.1	Wheat	cytosol	93.46	93.46
TraesCS5B01G179700.1	Wheat	cytosol	93.46	93.46
AT1G16890.3	Thale cress	cytosol	98.69	93.21
HORVU5Hr1G055360.2	Barley	cytosol, mitochondrion	93.46	92.26
GSMUA_Achr4P31050_001	Banana	cytosol	45.75	92.11
Zm00001d038995_P001	Maize	cytosol	98.04	92.02
HORVU1Hr1G086460.1	Barley	endoplasmic reticulum, extracellular	54.9	88.42
Zm00001d043905_P003	Maize	cytosol	97.39	88.17
VIT_19s0014g01460.t01	Wine grape	cytosol	88.89	87.74
HORVU1Hr1G086610.1	Barley	cytosol, plastid	97.39	85.63
HORVU1Hr1G086480.1	Barley	mitochondrion	94.77	75.52
HORVU3Hr1G061790.1	Barley	cytosol	99.35	74.88
Zm00001d011565_P002	Maize	cytosol, mitochondrion	96.73	74.37
KRH27335	Soybean	endoplasmic reticulum	72.55	73.51
TraesCS1B01G420600.1	Wheat	vacuole	84.31	62.93
Bra027688.1-P	Field mustard	cytosol	39.87	54.95
Bra003066.1-P	Field mustard	cytosol	47.71	49.32
Bra041101.1-P	Field mustard	cytosol	47.06	48.65
Bra001347.1-P	Field mustard	cytosol	47.06	48.65
Bra029076.1-P	Field mustard	cytosol	47.06	48.65
Bra022645.1-P	Field mustard	cytosol	47.06	48.65
Bra035605.1-P	Field mustard	cytosol	46.41	47.97
Bra002842.1-P	Field mustard	cytosol	45.75	47.3
Bra013049.1-P	Field mustard	cytosol	45.75	47.3
Bra032244.1-P	Field mustard	cytosol	44.44	45.33
Bra028946.1-P	Field mustard	cytosol	41.18	45.0
Bra027749.1-P	Field mustard	nucleus	41.83	42.11
Bra001995.1-P	Field mustard	cytosol	45.75	38.89
Bra026222.1-P	Field mustard	mitochondrion, nucleus	37.25	37.5
Bra017410.1-P	Field mustard	mitochondrion, nucleus	37.25	37.5
Bra016264.1-P	Field mustard	mitochondrion	37.25	37.5
Bra026582.1-P	Field mustard	mitochondrion, nucleus	36.6	36.84
Bra024808.1-P	Field mustard	mitochondrion, nucleus	36.6	36.84
Bra026833.1-P	Field mustard	mitochondrion, nucleus	36.6	36.84
Bra029252.1-P	Field mustard	mitochondrion, nucleus	35.95	36.67
Bra016704.1-P	Field mustard	nucleus	35.29	35.53
Bra027422.1-P	Field mustard	plastid	38.56	32.24
Bra016703.1-P	Field mustard	nucleus	36.6	26.67
Bra029711.1-P	Field mustard	nucleus	45.75	22.58

Protein Annotations

MapMan:19.2.2.1.4	Gene3D:3.10.110.10	EnsemblPlantsGene:Bra026700	EnsemblPlants:Bra026700.1	EnsemblPlants:Bra026700.1-P	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000608
InterPro:IPR016135	UniProt:M4ED40	PFAM:PF00179	ScanProsite:PS00183	PFscan:PS50127	PANTHER:PTHR43902
PANTHER:PTHR43902:SF4	SMART:SM00212	SUPFAM:SSF54495	InterPro:UBQ-conjugat_E2	InterPro:UBQ-conjugating_AS	InterPro:UBQ-conjugating_enzyme/RWD
UniParc:UPI0001BA82CC	:	:	:	:	:

Description

AT1G16890 (E=7e-085) UBC36, UBC13B | ubiquitin-conjugating enzyme, putative

Coordinates

chrA09:+:33271256..33272609

Molecular Weight (calculated)

17206.8 Da

IEP (calculated)

7.508

GRAVY (calculated)

-0.320

Length

153 amino acids

Sequence
(BLAST)

001: MANSNLPRRI IKETQRLLSE PAPGISASPS EENMRYFNVM ILGPSQSPYE GGVFKLELFL PEEYPMAAPK VRFLTKIYHP NIDKLGRICL DILKDKWSPA
101: LQIRTVLLSI QALLSAPNPD DPLSENIAKH WKSNEAEAVE TAKEWTRLYA SGA

Best Arabidopsis Sequence Match ( AT1G16890.2 )
(BLAST)

001: MANSNLPRRI IKETQRLLSE PAPGISASPS EENMRYFNVM ILGPTQSPYE GGVFKLELFL PEEYPMAAPK VRFLTKIYHP NIDKLGRICL DILKDKWSPA
101: LQIRTVLLSI QALLSAPNPD DPLSENIAKH WKSNEAEAVE TAKEWTRLYA SGA

Arabidopsis Description

UBC36Ubiquitin-conjugating enzyme 36 [Source:UniProtKB/TrEMBL;Acc:F4I615]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.