CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 4
nucleus 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G186100.1	Wheat	cytosol	97.39	97.39
TraesCS5B01G179700.1	Wheat	cytosol	97.39	97.39
TraesCS5A01G181700.1	Wheat	cytosol	97.39	97.39
HORVU5Hr1G055360.2	Barley	cytosol, mitochondrion	97.39	96.13
CDY54372	Canola	cytosol	96.08	96.08
Bra026700.1-P	Field mustard	cytosol	96.08	96.08
CDX83936	Canola	cytosol	96.08	96.08
EES03421	Sorghum	cytosol	96.08	96.08
CDX87428	Canola	cytosol	95.42	95.42
CDY35126	Canola	cytosol	95.42	95.42
Solyc10g007260.2.1	Tomato	plastid	95.42	95.42
CDX81788	Canola	cytosol	95.42	95.42
Bra026018.1-P	Field mustard	cytosol	95.42	95.42
Bra035071.1-P	Field mustard	cytosol	86.27	94.96
PGSC0003DMT400032251	Potato	cytosol	94.77	94.77
PGSC0003DMT400054795	Potato	cytosol	94.77	94.77
CDY40025	Canola	cytosol	94.77	94.77
KRH21984	Soybean	endoplasmic reticulum, nucleus	94.77	94.77
KRH26227	Soybean	cytosol	94.77	94.77
KRH55097	Soybean	endoplasmic reticulum	94.77	94.77
CDX96802	Canola	cytosol	94.77	94.77
CDX88485	Canola	cytosol	94.77	94.77
Bra016626.1-P	Field mustard	cytosol	94.77	94.77
Bra008383.1-P	Field mustard	cytosol	94.77	94.77
CDY26882	Canola	cytosol	89.54	94.48
CDY14587	Canola	cytosol	94.77	94.16
Solyc07g062570.2.1	Tomato	plastid	94.12	94.12
AT1G78870.2	Thale cress	cytosol	94.12	94.12
CDY57941	Canola	cytosol	92.81	91.61
GSMUA_Achr4P31050_001	Banana	cytosol	45.1	90.79
AT1G16890.3	Thale cress	cytosol	94.77	89.51
VIT_19s0014g01460.t01	Wine grape	cytosol	86.27	85.16
CDX79272	Canola	cytosol	92.81	83.53
KRH27335	Soybean	endoplasmic reticulum	72.55	73.51
KXG33034	Sorghum	cytosol	48.37	50.34
EER98641	Sorghum	cytosol	48.37	50.0
EES13053	Sorghum	cytosol	47.71	49.32
KXG29317	Sorghum	nucleus	47.06	48.65
EES19701	Sorghum	cytosol	47.06	48.65
EES01663	Sorghum	cytosol, nucleus, peroxisome	47.06	48.65
EER89829	Sorghum	cytosol	47.06	48.65
KXG37384	Sorghum	mitochondrion, nucleus	37.91	38.16
EER98036	Sorghum	mitochondrion, nucleus	37.91	38.16
EER97436	Sorghum	plastid	42.48	34.76
KXG31665	Sorghum	cytosol	38.56	33.15

Protein Annotations

MapMan:19.2.2.1.4	Gene3D:3.10.110.10	UniProt:A0A1B6QBT2	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005524	GO:GO:0016740	InterPro:IPR000608	InterPro:IPR016135	EnsemblPlants:KXG35379
ProteinID:KXG35379	ProteinID:KXG35379.1	PFAM:PF00179	ScanProsite:PS00183	PFscan:PS50127	PANTHER:PTHR43902
PANTHER:PTHR43902:SF4	MetaCyc:PWY-7511	SMART:SM00212	EnsemblPlantsGene:SORBI_3002G166900	SUPFAM:SSF54495	InterPro:UBQ-conjugat_E2
InterPro:UBQ-conjugating_AS	InterPro:UBQ-conjugating_enzyme/RWD	UniParc:UPI00022070D9	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:52114888..52119163

Molecular Weight (calculated)

17158.7 Da

IEP (calculated)

7.508

GRAVY (calculated)

-0.307

Length

153 amino acids

Sequence
(BLAST)

001: MANSNLPRRI IKETQRLLSE PAPGISASPS EENMRYFNVM ILGPSQSPYE GGVFKLELFL PEEYPMAPPK VRFLTKIYHP NIDKLGRICL DILKDKWSPA
101: LQIRTVLLSI QALLSAPNPD DPLADNVAKH WKANEAEAVE TAKEWTRVYA SGA

Best Arabidopsis Sequence Match ( AT1G16890.2 )
(BLAST)

001: MANSNLPRRI IKETQRLLSE PAPGISASPS EENMRYFNVM ILGPTQSPYE GGVFKLELFL PEEYPMAAPK VRFLTKIYHP NIDKLGRICL DILKDKWSPA
101: LQIRTVLLSI QALLSAPNPD DPLSENIAKH WKSNEAEAVE TAKEWTRLYA SGA

Arabidopsis Description

UBC36Ubiquitin-conjugating enzyme 36 [Source:UniProtKB/TrEMBL;Acc:F4I615]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.