Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 7
- cytosol 2
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d021904_P001 | Maize | plastid | 93.05 | 94.57 |
| TraesCS2A01G187000.1 | Wheat | plastid | 87.17 | 85.79 |
| TraesCS2B01G220200.1 | Wheat | plastid | 86.63 | 84.38 |
| Os07t0577400-01 | Rice | nucleus | 82.35 | 76.24 |
| GSMUA_Achr4P22180_001 | Banana | cytosol | 56.15 | 75.54 |
| VIT_06s0004g00730.t01 | Wine grape | plastid | 62.03 | 65.91 |
| KRH42820 | Soybean | plastid | 57.75 | 61.36 |
| Solyc01g005840.2.1 | Tomato | plastid | 57.75 | 59.67 |
| AT3G13550.1 | Thale cress | mitochondrion | 56.15 | 57.69 |
| Bra027422.1-P | Field mustard | plastid | 54.01 | 55.19 |
| CDY23617 | Canola | plastid | 54.01 | 55.19 |
| CDY59253 | Canola | mitochondrion | 54.01 | 55.19 |
| KXG33034 | Sorghum | cytosol | 43.32 | 55.1 |
| EER98641 | Sorghum | cytosol | 42.78 | 54.05 |
| EES01663 | Sorghum | cytosol, nucleus, peroxisome | 42.25 | 53.38 |
| EES19701 | Sorghum | cytosol | 42.25 | 53.38 |
| EES13053 | Sorghum | cytosol | 41.71 | 52.7 |
| EER89829 | Sorghum | cytosol | 41.18 | 52.03 |
| KXG29317 | Sorghum | nucleus | 40.11 | 50.68 |
| KXG35379 | Sorghum | cytosol | 34.76 | 42.48 |
| EES03421 | Sorghum | cytosol | 34.22 | 41.83 |
| KXG37384 | Sorghum | mitochondrion, nucleus | 24.06 | 29.61 |
| EER98036 | Sorghum | mitochondrion, nucleus | 24.06 | 29.61 |
| KXG31665 | Sorghum | cytosol | 23.53 | 24.72 |
Protein Annotations
| MapMan:19.2.2.8.3.3.1 | Gene3D:3.10.110.10 | EntrezGene:8057350 | UniProt:C5XCE6 | EnsemblPlants:EER97436 | ProteinID:EER97436 |
| ProteinID:EER97436.1 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0009628 | GO:GO:0009791 | GO:GO:0010099 | InterPro:IPR000608 | InterPro:IPR016135 |
| PFAM:PF00179 | PFscan:PS50127 | PANTHER:PTHR24068 | PANTHER:PTHR24068:SF41 | SMART:SM00212 | EnsemblPlantsGene:SORBI_3002G351900 |
| SUPFAM:SSF54495 | InterPro:UBQ-conjugat_E2 | InterPro:UBQ-conjugating_enzyme/RWD | UniParc:UPI0001A837B4 | RefSeq:XP_002460915.1 | SEG:seg |
Description
hypothetical protein
Coordinates
chr2:+:71546157..71549233
Molecular Weight (calculated)
20217.0 Da
IEP (calculated)
9.066
GRAVY (calculated)
-0.277
Length
187 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSSSFPNSR FPFGAGARAP GGSGGGGGSS VRPWGSSGGT SVSSSGKRIQ KELLDLNASD CSAGPKGDNL YHWLSTIIGP QGSPYEGGVF FLDIVFPPDY
101: PFKPPMVTFK TRIYHCNIDS TGKVHLDILK DGWSPAFTIS KVLLAIKDII SNPDPYTPLV MNISRQYLTD RAKHDEIAAE WTMRFAR
101: PFKPPMVTFK TRIYHCNIDS TGKVHLDILK DGWSPAFTIS KVLLAIKDII SNPDPYTPLV MNISRQYLTD RAKHDEIAAE WTMRFAR
001: MMTPGGSGRL RPLPTAMYAG YSGTASSWVA KTSVSASGKR IQREMAELNI DPPPDCSAGP KGDNLYHWIA TIIGPSGTPY EGGIFFLDII FPSDYPFKPP
101: KLVFKTRIYH CNVDTAGDLS VNILRDSWSP ALTITKVLQA IRSIFLKPEP YSPALPVIAR LYLTDREKHD EVAKEWTLRF AK
101: KLVFKTRIYH CNVDTAGDLS VNILRDSWSP ALTITKVLQA IRSIFLKPEP YSPALPVIAR LYLTDREKHD EVAKEWTLRF AK
Arabidopsis Description
COP10FUS9 [Source:UniProtKB/TrEMBL;Acc:A0A178VI85]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.