CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
vacuole 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EER95229

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G08690.1	EER95229	AT3G49810.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES01663	Sorghum	cytosol, nucleus, peroxisome	99.32	99.32
TraesCS1D01G301300.1	Wheat	cytosol, nucleus, peroxisome	98.65	98.65
TraesCS1B01G311400.1	Wheat	cytosol, nucleus, peroxisome	98.65	98.65
TraesCS1A01G301600.1	Wheat	cytosol, nucleus, peroxisome	98.65	98.65
HORVU0Hr1G002220.2	Barley	cytosol, nucleus, peroxisome	98.65	98.65
TraesCS3D01G336300.1	Wheat	cytosol, nucleus, peroxisome	97.97	97.97
TraesCS3B01G374500.1	Wheat	cytosol, nucleus, peroxisome	97.97	97.97
TraesCS3A01G342500.1	Wheat	cytosol, nucleus, peroxisome	97.97	97.97
EES13053	Sorghum	cytosol	96.62	96.62
HORVU3Hr1G080790.2	Barley	cytosol	97.97	96.03
AT3G08690.1	Thale cress	cytosol	94.59	94.59
EER89829	Sorghum	cytosol	94.59	94.59
Bra001347.1-P	Field mustard	cytosol	93.92	93.92
Bra041101.1-P	Field mustard	cytosol	93.92	93.92
Os01t0819400-00	Rice	cytosol	99.32	93.04
KXG33034	Sorghum	cytosol	91.22	91.84
Zm00001d010618_P003	Maize	cytosol	100.0	90.8
EER98641	Sorghum	cytosol	89.86	89.86
KXG29317	Sorghum	nucleus	86.49	86.49
HORVU1Hr1G069530.1	Barley	cytosol, plastid	98.65	68.54
KXG35379	Sorghum	cytosol	48.65	47.06
EES03421	Sorghum	cytosol	48.65	47.06
Bra029711.1-P	Field mustard	nucleus	91.89	43.87
EER97436	Sorghum	plastid	53.38	42.25
KXG37384	Sorghum	mitochondrion, nucleus	43.24	42.11
EER98036	Sorghum	mitochondrion, nucleus	42.57	41.45
KXG31665	Sorghum	cytosol	41.89	34.83

Protein Annotations

MapMan:19.2.2.5.2	Gene3D:3.10.110.10	EntrezGene:8077009	UniProt:C5YZT9	EnsemblPlants:EES19701	ProteinID:EES19701
ProteinID:EES19701.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842	GO:GO:0005488
GO:GO:0005524	GO:GO:0006464	GO:GO:0006511	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009987	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000608	InterPro:IPR016135
PFAM:PF00179	ScanProsite:PS00183	PFscan:PS50127	PANTHER:PTHR24068	PANTHER:PTHR24068:SF55	MetaCyc:PWY-7511
SMART:SM00212	EnsemblPlantsGene:SORBI_3009G174900	SUPFAM:SSF54495	unigene:Sbi.8284	InterPro:UBQ-conjugat_E2	InterPro:UBQ-conjugating_AS
InterPro:UBQ-conjugating_enzyme/RWD	UniParc:UPI00000AB365	RefSeq:XP_002441271.1	:	:	:

Description

hypothetical protein

Coordinates

chr9:-:53010691..53015218

Molecular Weight (calculated)

16503.9 Da

IEP (calculated)

8.068

GRAVY (calculated)

-0.382

Length

148 amino acids

Sequence
(BLAST)

001: MASKRILKEL KDLQKDPPTS CSAGPAGEDM FHWQATIMGP PDSPYAGGVF LVNIHFPPDY PFKPPKVSFK TKVFHPNINS NGSICLDILK EQWSPALTIS
101: KVLLSICSLL TDPNPDDPLV PEIAHMYKTD RPKYESTARS WTQKYAMG

Best Arabidopsis Sequence Match ( AT3G08690.1 )
(BLAST)

001: MASKRILKEL KDLQKDPPSN CSAGPVAEDM FHWQATIMGP PESPYAGGVF LVSIHFPPDY PFKPPKVSFK TKVYHPNINS NGSICLDILK EQWSPALTIS
101: KVLLSICSLL TDPNPDDPLV PEIAHMYKTD RSKYESTARS WTQKYAMG

Arabidopsis Description

UBC11Ubiquitin-conjugating enzyme E2 11 [Source:UniProtKB/Swiss-Prot;Acc:P35134]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.