Factsheet for HORVU1Hr1G069530.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 2
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU4Hr1G066070.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G08690.1	HORVU4Hr1G066070.1	AT3G49810.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU0Hr1G002220.2	Barley	cytosol, nucleus, peroxisome	69.48	100.0
TraesCS1D01G301300.1	Wheat	cytosol, nucleus, peroxisome	69.48	100.0
TraesCS1B01G311400.1	Wheat	cytosol, nucleus, peroxisome	69.48	100.0
TraesCS1A01G301600.1	Wheat	cytosol, nucleus, peroxisome	69.48	100.0
TraesCS3A01G342500.1	Wheat	cytosol, nucleus, peroxisome	69.01	99.32
HORVU3Hr1G080790.2	Barley	cytosol	69.95	98.68
EES19701	Sorghum	cytosol	68.54	98.65
Os01t0819400-00	Rice	cytosol	70.42	94.94
AT3G08690.1	Thale cress	cytosol	65.73	94.59
Bra001347.1-P	Field mustard	cytosol	65.26	93.92
Bra041101.1-P	Field mustard	cytosol	64.79	93.24
HORVU7Hr1G080800.2	Barley	cytosol, nucleus, peroxisome	64.32	92.57
Zm00001d010618_P003	Maize	cytosol	69.95	91.41
HORVU3Hr1G059290.1	Barley	cytosol	62.91	91.16
HORVU2Hr1G118240.5	Barley	cytosol	54.46	90.62
HORVU5Hr1G053810.1	Barley	cytosol	60.09	86.49
HORVU1Hr1G086460.1	Barley	endoplasmic reticulum, extracellular	21.6	48.42
HORVU5Hr1G055360.2	Barley	cytosol, mitochondrion	33.33	45.81
GSMUA_Achr5P04210_001	Banana	cytosol	35.21	44.38
Bra029711.1-P	Field mustard	nucleus	63.85	43.87
HORVU1Hr1G086610.1	Barley	cytosol, plastid	33.8	41.38
HORVU1Hr1G086480.1	Barley	mitochondrion	34.27	38.02
HORVU3Hr1G061790.1	Barley	cytosol	34.27	35.96
HORVU3Hr1G020470.1	Barley	plastid	30.05	28.19
HORVU1Hr1G027600.1	Barley	plastid	29.11	26.27

Protein Annotations

MapMan:19.2.2.5.2	Gene3D:3.10.110.10	UniProt:A0A287G3N8	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005524	GO:GO:0016740	EnsemblPlantsGene:HORVU1Hr1G069530	EnsemblPlants:HORVU1Hr1G069530.1	InterPro:IPR000608
InterPro:IPR016135	PFAM:PF00179	ScanProsite:PS00183	PFscan:PS50127	PANTHER:PTHR24068	PANTHER:PTHR24068:SF55
SMART:SM00212	SUPFAM:SSF54495	InterPro:UBQ-conjugat_E2	InterPro:UBQ-conjugating_AS	InterPro:UBQ-conjugating_enzyme/RWD	UniParc:UPI000B47A6D4
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr1H:+:486166387..486169614

Molecular Weight (calculated)

23825.7 Da

IEP (calculated)

10.243

GRAVY (calculated)

-0.616

Length

213 amino acids

Sequence
(BLAST)

001: ARHHHKARDP ERKTPPPKAP SVPLSSPRSP SPTSRCKKVW KPSPPPSLPL LFSRDSPTDR RRLIVMASKR ILKELKDLQK DPPTSCSAGP AGEDMFHWQA
101: TIMGPPDSPY AGGVFLVNIH FPPDYPFKPP KVSFKTKVFH PNINSNGSIC LDILKEQWSP ALTISKVLLS ICSLLTDPNP DDPLVPEIAH MYKTDRSKYE
201: TTARSWTQKY AMG

Best Arabidopsis Sequence Match ( AT4G27960.2 )
(BLAST)

001: MFFFFLIHLT IGLVFDCRVF NWNLDRGILE MASKRILKEL KDLQKDPPTS CSAGPVAEDM FHWQATIMGP SDSPYSGGVF LVTIHFPPDY PFKPPKVAFR
101: TKVFHPNINS NGSICLDILK EQWSPALTIS KVLLSICSLL TDPNPDDPLV PEIAHMYKTD KNKYESTART WTQKYAMG

Arabidopsis Description

UBC9Ubiquitin conjugating enzyme 9 [Source:UniProtKB/TrEMBL;Acc:F4JKF3]
SUBAcon: [endoplasmic reticulum,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.