Factsheet for HORVU5Hr1G055360.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	mitochondrion
TargetP:	plastid
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G181700.1	Wheat	cytosol	98.71	100.0
TraesCS5B01G179700.1	Wheat	cytosol	98.71	100.0
TraesCS5D01G186100.1	Wheat	cytosol	98.71	100.0
KXG35379	Sorghum	cytosol	96.13	97.39
Bra026018.1-P	Field mustard	cytosol	92.9	94.12
PGSC0003DMT400032251	Potato	cytosol	92.9	94.12
CDX81788	Canola	cytosol	92.9	94.12
Solyc10g007260.2.1	Tomato	plastid	92.9	94.12
CDY35126	Canola	cytosol	92.9	94.12
KRH21984	Soybean	endoplasmic reticulum, nucleus	92.26	93.46
KRH26227	Soybean	cytosol	92.26	93.46
KRH55097	Soybean	endoplasmic reticulum	92.26	93.46
PGSC0003DMT400054795	Potato	cytosol	92.26	93.46
Solyc07g062570.2.1	Tomato	plastid	92.26	93.46
CDY54372	Canola	cytosol	92.26	93.46
CDY40025	Canola	cytosol	92.26	93.46
CDX96802	Canola	cytosol	92.26	93.46
CDX83936	Canola	cytosol	92.26	93.46
Bra026700.1-P	Field mustard	cytosol	92.26	93.46
Bra016626.1-P	Field mustard	cytosol	92.26	93.46
CDX87428	Canola	cytosol	91.61	92.81
AT1G78870.2	Thale cress	cytosol	91.61	92.81
CDY26882	Canola	cytosol	86.45	92.41
CDX88485	Canola	cytosol	90.97	92.16
Bra008383.1-P	Field mustard	cytosol	90.97	92.16
Bra035071.1-P	Field mustard	cytosol	82.58	92.09
CDY14587	Canola	cytosol	90.97	91.56
GSMUA_Achr4P31050_001	Banana	cytosol	43.87	89.47
CDY57941	Canola	cytosol	89.03	89.03
AT1G16890.3	Thale cress	cytosol	92.26	88.27
VIT_19s0014g01460.t01	Wine grape	cytosol	85.16	85.16
HORVU1Hr1G086460.1	Barley	endoplasmic reticulum, extracellular	50.97	83.16
HORVU1Hr1G086610.1	Barley	cytosol, plastid	92.26	82.18
CDX79272	Canola	cytosol	89.03	81.18
KRH27335	Soybean	endoplasmic reticulum	72.26	74.17
HORVU1Hr1G086480.1	Barley	mitochondrion	89.68	72.4
HORVU3Hr1G061790.1	Barley	cytosol	92.26	70.44
HORVU3Hr1G059290.1	Barley	cytosol	47.1	49.66
HORVU0Hr1G002220.2	Barley	cytosol, nucleus, peroxisome	45.81	47.97
HORVU2Hr1G118240.5	Barley	cytosol	39.35	47.66
HORVU5Hr1G053810.1	Barley	cytosol	45.16	47.3
HORVU7Hr1G080800.2	Barley	cytosol, nucleus, peroxisome	45.16	47.3
HORVU3Hr1G080790.2	Barley	cytosol	45.81	47.02
HORVU1Hr1G069530.1	Barley	cytosol, plastid	45.81	33.33
HORVU3Hr1G020470.1	Barley	plastid	38.71	26.43
HORVU1Hr1G027600.1	Barley	plastid	38.06	25.0

Protein Annotations

MapMan:19.2.2.1.4	Gene3D:3.10.110.10	UniProt:A0A287RAC0	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005524	GO:GO:0016740	EnsemblPlantsGene:HORVU5Hr1G055360	EnsemblPlants:HORVU5Hr1G055360.2	InterPro:IPR000608
InterPro:IPR016135	PFAM:PF00179	ScanProsite:PS00183	PFscan:PS50127	PANTHER:PTHR43902	PANTHER:PTHR43902:SF4
SMART:SM00212	SUPFAM:SSF54495	InterPro:UBQ-conjugat_E2	InterPro:UBQ-conjugating_AS	InterPro:UBQ-conjugating_enzyme/RWD	UniParc:UPI000B47583A

Description

No Description!

Coordinates

chrchr5H:+:434306622..434309646

Molecular Weight (calculated)

17529.2 Da

IEP (calculated)

6.535

GRAVY (calculated)

-0.354

Length

155 amino acids

Sequence
(BLAST)

001: MANSNLPRRI IKLQETQRLL SEPAPGISAS PSEENMRYFN VMILGPTQSP YEGGVFKLEL FLPEEYPMAP PKVRFLTKIY HPNIDKLGRI CLDILKDKWS
101: PALQIRTVLL SIQALLSAPN PDDPLADNVA KHWKANETEA VETAKEWTRV YANDA

Best Arabidopsis Sequence Match ( AT1G16890.2 )
(BLAST)

001: MANSNLPRRI IKETQRLLSE PAPGISASPS EENMRYFNVM ILGPTQSPYE GGVFKLELFL PEEYPMAAPK VRFLTKIYHP NIDKLGRICL DILKDKWSPA
101: LQIRTVLLSI QALLSAPNPD DPLSENIAKH WKSNEAEAVE TAKEWTRLYA SGA

Arabidopsis Description

UBC36Ubiquitin-conjugating enzyme 36 [Source:UniProtKB/TrEMBL;Acc:F4I615]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.