Factsheet for HORVU1Hr1G027600.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid, vacuole
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
TargetP:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G140300.1	Wheat	mitochondrion	64.41	100.0
TraesCS1D01G121800.1	Wheat	mitochondrion, nucleus	63.98	99.34
Os05t0182500-02	Rice	mitochondrion, nucleus	63.98	99.34
EER98036	Sorghum	mitochondrion, nucleus	63.14	98.03
KRH45858	Soybean	mitochondrion, nucleus	63.14	98.03
PGSC0003DMT400046771	Potato	mitochondrion, nucleus	62.29	96.71
GSMUA_Achr6P04830_001	Banana	cytosol, nucleus, plastid	58.47	96.5
TraesCS2A01G247700.1	Wheat	nucleus	61.86	96.05
Solyc03g113100.2.1	Tomato	mitochondrion, nucleus	61.86	96.05
CDY11654	Canola	mitochondrion	61.44	95.39
CDY38761	Canola	mitochondrion	61.44	95.39
Bra016264.1-P	Field mustard	mitochondrion	61.44	95.39
HORVU3Hr1G020470.1	Barley	plastid	63.98	66.52
HORVU3Hr1G059290.1	Barley	cytosol	26.69	42.86
HORVU7Hr1G080800.2	Barley	cytosol, nucleus, peroxisome	26.69	42.57
VIT_14s0108g00140.t01	Wine grape	cytosol, plastid	38.98	42.4
HORVU0Hr1G002220.2	Barley	cytosol, nucleus, peroxisome	26.27	41.89
HORVU2Hr1G118240.5	Barley	cytosol	22.46	41.41
HORVU3Hr1G080790.2	Barley	cytosol	26.27	41.06
HORVU5Hr1G053810.1	Barley	cytosol	25.42	40.54
HORVU5Hr1G055360.2	Barley	cytosol, mitochondrion	25.0	38.06
HORVU1Hr1G086610.1	Barley	cytosol, plastid	24.15	32.76
HORVU1Hr1G086460.1	Barley	endoplasmic reticulum, extracellular	13.14	32.63
HORVU1Hr1G086480.1	Barley	mitochondrion	23.73	29.17
HORVU1Hr1G069530.1	Barley	cytosol, plastid	26.27	29.11
HORVU3Hr1G061790.1	Barley	cytosol	25.0	29.06

Protein Annotations

MapMan:19.2.2.1.4	Gene3D:3.10.110.10	UniProt:A0A287EZT2	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005524	GO:GO:0016740	EnsemblPlantsGene:HORVU1Hr1G027600	EnsemblPlants:HORVU1Hr1G027600.1	InterPro:IPR000608
InterPro:IPR016135	PFAM:PF00179	ScanProsite:PS00183	PFscan:PS50127	PANTHER:PTHR43898	PANTHER:PTHR43898:SF8
SMART:SM00212	SUPFAM:SSF54495	InterPro:UBQ-conjugat_E2	InterPro:UBQ-conjugating_AS	InterPro:UBQ-conjugating_enzyme/RWD	UniParc:UPI000B46F396
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr1H:-:141561006..141570786

Molecular Weight (calculated)

26585.6 Da

IEP (calculated)

8.615

GRAVY (calculated)

-0.516

Length

236 amino acids

Sequence
(BLAST)

001: RPSVLLFGCN ALLPPRFAPN PFPSAPFPLS NKEPSAPESG QVRWRLHPIN STAVCYSPWS LGRWLYGGRF PRDLPGRPEP EKAGMSTPAR KRLMRDFKRL
101: MQDPPAGISG APQDNNIMLW NAVIFGPDDT PWDGGTFKLT LQFTEDYPNK PPTVRFVSRM FHPNIYADGS ICLDILQNQW SPIYDVAAIL TSIQSLLCDP
201: NPNSPANSEA ARLFSENKRE YNRKVREVVE QSWTAD

Best Arabidopsis Sequence Match ( AT2G02760.3 )
(BLAST)

001: MSTPARKRLM RDFKRLQQDP PAGISGAPQD NNIMLWNAVI FGPDDTPWDG GTFKLSLQFS EDYPNKPPTV RFVSRMFHPN IYADGSICLD ILQNQWSPIY
101: DVAAILTSIQ SLLCDPNPNS PANSEAARMF SESKREYNRR VREVVEQSWT AD

Arabidopsis Description

UBC2UBC2 [Source:UniProtKB/TrEMBL;Acc:A0A178W0U6]
SUBAcon: [mitochondrion,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.