Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- endoplasmic reticulum 2
- extracellular 2
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY26882 | Canola | cytosol | 87.37 | 57.24 |
| TraesCS1D01G400600.1 | Wheat | cytosol | 90.53 | 56.21 |
| TraesCS1A01G392400.1 | Wheat | cytosol | 90.53 | 56.21 |
| CDX87428 | Canola | cytosol | 88.42 | 54.9 |
| Solyc10g007260.2.1 | Tomato | plastid | 88.42 | 54.9 |
| CDY54372 | Canola | cytosol | 88.42 | 54.9 |
| CDY35126 | Canola | cytosol | 88.42 | 54.9 |
| CDX96802 | Canola | cytosol | 88.42 | 54.9 |
| CDX88485 | Canola | cytosol | 88.42 | 54.9 |
| CDX83936 | Canola | cytosol | 88.42 | 54.9 |
| CDX81788 | Canola | cytosol | 88.42 | 54.9 |
| Bra026700.1-P | Field mustard | cytosol | 88.42 | 54.9 |
| Bra026018.1-P | Field mustard | cytosol | 88.42 | 54.9 |
| Bra016626.1-P | Field mustard | cytosol | 88.42 | 54.9 |
| KRH21984 | Soybean | endoplasmic reticulum, nucleus | 88.42 | 54.9 |
| AT1G78870.2 | Thale cress | cytosol | 87.37 | 54.25 |
| PGSC0003DMT400032251 | Potato | cytosol | 87.37 | 54.25 |
| PGSC0003DMT400054795 | Potato | cytosol | 87.37 | 54.25 |
| KRH55097 | Soybean | endoplasmic reticulum | 87.37 | 54.25 |
| Solyc07g062570.2.1 | Tomato | plastid | 87.37 | 54.25 |
| KRH26227 | Soybean | cytosol | 87.37 | 54.25 |
| CDY40025 | Canola | cytosol | 87.37 | 54.25 |
| Bra008383.1-P | Field mustard | cytosol | 87.37 | 54.25 |
| CDY14587 | Canola | cytosol | 87.37 | 53.9 |
| CDY57941 | Canola | cytosol | 86.32 | 52.9 |
| AT1G16890.3 | Thale cress | cytosol | 88.42 | 51.85 |
| Zm00001d009552_P002 | Maize | cytosol | 86.32 | 51.57 |
| HORVU5Hr1G055360.2 | Barley | cytosol, mitochondrion | 83.16 | 50.97 |
| Bra035071.1-P | Field mustard | cytosol | 73.68 | 50.36 |
| Zm00001d038995_P001 | Maize | cytosol | 86.32 | 50.31 |
| HORVU1Hr1G086610.1 | Barley | cytosol, plastid | 90.53 | 49.43 |
| CDX79272 | Canola | cytosol | 87.37 | 48.82 |
| VIT_19s0014g01460.t01 | Wine grape | cytosol | 74.74 | 45.81 |
| HORVU1Hr1G086480.1 | Barley | mitochondrion | 90.53 | 44.79 |
| TraesCS1B01G420600.1 | Wheat | vacuole | 91.58 | 42.44 |
| HORVU3Hr1G061790.1 | Barley | cytosol | 88.42 | 41.38 |
| HORVU2Hr1G118240.5 | Barley | cytosol | 48.42 | 35.94 |
| HORVU5Hr1G053810.1 | Barley | cytosol | 50.53 | 32.43 |
| HORVU3Hr1G059290.1 | Barley | cytosol | 49.47 | 31.97 |
| HORVU7Hr1G080800.2 | Barley | cytosol, nucleus, peroxisome | 49.47 | 31.76 |
| KRH27335 | Soybean | endoplasmic reticulum | 49.47 | 31.13 |
| HORVU0Hr1G002220.2 | Barley | cytosol, nucleus, peroxisome | 48.42 | 31.08 |
| HORVU3Hr1G080790.2 | Barley | cytosol | 48.42 | 30.46 |
| HORVU1Hr1G069530.1 | Barley | cytosol, plastid | 48.42 | 21.6 |
| HORVU3Hr1G020470.1 | Barley | plastid | 32.63 | 13.66 |
| HORVU1Hr1G027600.1 | Barley | plastid | 32.63 | 13.14 |
| GSMUA_Achr4P31050_001 | Banana | cytosol | 5.26 | 6.58 |
Protein Annotations
| Gene3D:3.10.110.10 | MapMan:35.1 | UniProt:A0A287GLB3 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0016740 | EnsemblPlantsGene:HORVU1Hr1G086460 | EnsemblPlants:HORVU1Hr1G086460.1 | InterPro:IPR000608 |
| InterPro:IPR016135 | PFAM:PF00179 | ScanProsite:PS00183 | PFscan:PS50127 | PANTHER:PTHR43902 | PANTHER:PTHR43902:SF4 |
| SMART:SM00212 | SUPFAM:SSF54495 | InterPro:UBQ-conjugat_E2 | InterPro:UBQ-conjugating_AS | InterPro:UBQ-conjugating_enzyme/RWD | UniParc:UPI000B47A68B |
Description
No Description!
Coordinates
chrchr1H:+:537511081..537512003
Molecular Weight (calculated)
10931.4 Da
IEP (calculated)
8.495
GRAVY (calculated)
-0.081
Length
95 amino acids
Sequence
(BLAST)
(BLAST)
1: LRDIILWLFL MQVRFLTKIY HPNIDKLGRI CLDILKDKWS PALQIRTVLL SIQALLSAPN PDDPLSENVA KHWKSNEAEA VETAKEWTRM YASGA
001: MRYFNVMILG PTQSPYEGGV FKLELFLPEE YPMAAPKVRF LTKIYHPNID KLGRICLDIL KDKWSPALQI RTVLLSIQAL LSAPNPDDPL SENIAKHWKS
101: NEAEAVETAK EWTRLYASGA
101: NEAEAVETAK EWTRLYASGA
Arabidopsis Description
UBC36Ubiquitin-conjugating enzyme 36 [Source:UniProtKB/TrEMBL;Acc:F4I615]
SUBAcon: [plastid,vacuole,cytosol]
SUBAcon: [plastid,vacuole,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.