Factsheet for Bra008383.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 4
nucleus 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY26882	Canola	cytosol	94.77	100.0
CDY14587	Canola	cytosol	100.0	99.35
Bra035071.1-P	Field mustard	cytosol	90.2	99.28
Bra026700.1-P	Field mustard	cytosol	98.69	98.69
Bra016626.1-P	Field mustard	cytosol	98.69	98.69
TraesCS3D01G271400.1	Wheat	cytosol	98.04	98.04
Solyc10g007260.2.1	Tomato	plastid	98.04	98.04
Bra026018.1-P	Field mustard	cytosol	98.04	98.04
TraesCS3A01G271800.1	Wheat	cytosol	98.04	98.04
TraesCS3B01G305500.1	Wheat	mitochondrion	98.04	98.04
KRH26227	Soybean	cytosol	98.04	98.04
TraesCS1D01G400600.1	Wheat	cytosol	97.39	97.39
KRH55097	Soybean	endoplasmic reticulum	97.39	97.39
TraesCS1A01G392400.1	Wheat	cytosol	97.39	97.39
KRH21984	Soybean	endoplasmic reticulum, nucleus	97.39	97.39
PGSC0003DMT400032251	Potato	cytosol	97.39	97.39
PGSC0003DMT400054795	Potato	cytosol	97.39	97.39
AT1G78870.2	Thale cress	cytosol	96.73	96.73
Os01t0673600-01	Rice	extracellular, plasma membrane, plastid	96.73	96.73
Solyc07g062570.2.1	Tomato	plastid	96.73	96.73
EES03421	Sorghum	cytosol	96.08	96.08
KXG35379	Sorghum	cytosol	94.77	94.77
Zm00001d009552_P002	Maize	cytosol	96.73	93.08
TraesCS5A01G181700.1	Wheat	cytosol	92.16	92.16
TraesCS5B01G179700.1	Wheat	cytosol	92.16	92.16
TraesCS5D01G186100.1	Wheat	cytosol	92.16	92.16
HORVU5Hr1G055360.2	Barley	cytosol, mitochondrion	92.16	90.97
Zm00001d038995_P001	Maize	cytosol	96.73	90.8
GSMUA_Achr4P31050_001	Banana	cytosol	45.1	90.79
HORVU1Hr1G086460.1	Barley	endoplasmic reticulum, extracellular	54.25	87.37
VIT_19s0014g01460.t01	Wine grape	cytosol	88.24	87.1
Zm00001d043905_P003	Maize	cytosol	96.08	86.98
HORVU1Hr1G086610.1	Barley	cytosol, plastid	97.39	85.63
HORVU1Hr1G086480.1	Barley	mitochondrion	94.77	75.52
HORVU3Hr1G061790.1	Barley	cytosol	98.04	73.89
Zm00001d011565_P002	Maize	cytosol, mitochondrion	95.42	73.37
KRH27335	Soybean	endoplasmic reticulum	71.9	72.85
TraesCS1B01G420600.1	Wheat	vacuole	84.31	62.93
Bra027688.1-P	Field mustard	cytosol	39.87	54.95
Bra003066.1-P	Field mustard	cytosol	47.06	48.65
Bra041101.1-P	Field mustard	cytosol	46.41	47.97
Bra001347.1-P	Field mustard	cytosol	46.41	47.97
Bra029076.1-P	Field mustard	cytosol	46.41	47.97
Bra022645.1-P	Field mustard	cytosol	46.41	47.97
Bra035605.1-P	Field mustard	cytosol	45.75	47.3
Bra002842.1-P	Field mustard	cytosol	45.1	46.62
Bra013049.1-P	Field mustard	cytosol	45.1	46.62
Bra032244.1-P	Field mustard	cytosol	43.79	44.67
Bra028946.1-P	Field mustard	cytosol	40.52	44.29
Bra027749.1-P	Field mustard	nucleus	41.18	41.45
Bra001995.1-P	Field mustard	cytosol	45.1	38.33
Bra026222.1-P	Field mustard	mitochondrion, nucleus	36.6	36.84
Bra017410.1-P	Field mustard	mitochondrion, nucleus	36.6	36.84
Bra016264.1-P	Field mustard	mitochondrion	36.6	36.84
Bra026833.1-P	Field mustard	mitochondrion, nucleus	35.95	36.18
Bra024808.1-P	Field mustard	mitochondrion, nucleus	35.95	36.18
Bra026582.1-P	Field mustard	mitochondrion, nucleus	35.95	36.18
Bra029252.1-P	Field mustard	mitochondrion, nucleus	35.29	36.0
Bra016704.1-P	Field mustard	nucleus	34.64	34.87
Bra027422.1-P	Field mustard	plastid	37.91	31.69
Bra016703.1-P	Field mustard	nucleus	35.95	26.19
Bra029711.1-P	Field mustard	nucleus	45.1	22.26

Protein Annotations

MapMan:19.2.2.1.4	Gene3D:3.10.110.10	EnsemblPlantsGene:Bra008383	EnsemblPlants:Bra008383.1	EnsemblPlants:Bra008383.1-P	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0016740	InterPro:IPR000608
InterPro:IPR016135	UniProt:M4CVY6	PFAM:PF00179	ScanProsite:PS00183	PFscan:PS50127	PANTHER:PTHR43902
PANTHER:PTHR43902:SF4	SMART:SM00212	SUPFAM:SSF54495	InterPro:UBQ-conjugat_E2	InterPro:UBQ-conjugating_AS	InterPro:UBQ-conjugating_enzyme/RWD
UniParc:UPI00025466BB	:	:	:	:	:

Description

AT1G16890 (E=2e-084) UBC36, UBC13B | ubiquitin-conjugating enzyme, putative

Coordinates

chrA02:+:15204122..15205400

Molecular Weight (calculated)

17250.8 Da

IEP (calculated)

6.537

GRAVY (calculated)

-0.356

Length

153 amino acids

Sequence
(BLAST)

001: MANSNLPRRI IKETQRLLSE PAPGISASPS EENMRYFNVM VLGPSQSPYE GGVFKLELFL PEEYPMAAPK VRFLTKIYHP NIDKLGRICL DILKDKWSPA
101: LQIRTVLLSI QALLSAPNPD DPLSENIAKH WKSNEAEAVE TAKEWTRLYA SGE

Best Arabidopsis Sequence Match ( AT1G16890.2 )
(BLAST)

001: MANSNLPRRI IKETQRLLSE PAPGISASPS EENMRYFNVM ILGPTQSPYE GGVFKLELFL PEEYPMAAPK VRFLTKIYHP NIDKLGRICL DILKDKWSPA
101: LQIRTVLLSI QALLSAPNPD DPLSENIAKH WKSNEAEAVE TAKEWTRLYA SGA

Arabidopsis Description

UBC36Ubiquitin-conjugating enzyme 36 [Source:UniProtKB/TrEMBL;Acc:F4I615]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.