Factsheet for Bra026018.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 4
nucleus 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY35126	Canola	cytosol	100.0	100.0
Solyc10g007260.2.1	Tomato	plastid	100.0	100.0
Bra026700.1-P	Field mustard	cytosol	99.35	99.35
PGSC0003DMT400054795	Potato	cytosol	99.35	99.35
TraesCS3A01G271800.1	Wheat	cytosol	99.35	99.35
TraesCS3B01G305500.1	Wheat	mitochondrion	99.35	99.35
TraesCS3D01G271400.1	Wheat	cytosol	99.35	99.35
PGSC0003DMT400032251	Potato	cytosol	99.35	99.35
Bra016626.1-P	Field mustard	cytosol	99.35	99.35
KRH55097	Soybean	endoplasmic reticulum	99.35	99.35
KRH26227	Soybean	cytosol	99.35	99.35
KRH21984	Soybean	endoplasmic reticulum, nucleus	99.35	99.35
Solyc07g062570.2.1	Tomato	plastid	98.69	98.69
Bra035071.1-P	Field mustard	cytosol	89.54	98.56
Os01t0673600-01	Rice	extracellular, plasma membrane, plastid	98.04	98.04
Bra008383.1-P	Field mustard	cytosol	98.04	98.04
EES03421	Sorghum	cytosol	97.39	97.39
TraesCS1A01G392400.1	Wheat	cytosol	97.39	97.39
TraesCS1D01G400600.1	Wheat	cytosol	97.39	97.39
KXG35379	Sorghum	cytosol	95.42	95.42
Zm00001d009552_P002	Maize	cytosol	98.04	94.34
TraesCS5A01G181700.1	Wheat	cytosol	94.12	94.12
TraesCS5B01G179700.1	Wheat	cytosol	94.12	94.12
TraesCS5D01G186100.1	Wheat	cytosol	94.12	94.12
AT1G16890.3	Thale cress	cytosol	99.35	93.83
HORVU5Hr1G055360.2	Barley	cytosol, mitochondrion	94.12	92.9
GSMUA_Achr4P31050_001	Banana	cytosol	45.75	92.11
Zm00001d038995_P001	Maize	cytosol	98.04	92.02
HORVU1Hr1G086460.1	Barley	endoplasmic reticulum, extracellular	54.9	88.42
VIT_19s0014g01460.t01	Wine grape	cytosol	89.54	88.39
Zm00001d043905_P003	Maize	cytosol	97.39	88.17
HORVU1Hr1G086610.1	Barley	cytosol, plastid	97.39	85.63
HORVU1Hr1G086480.1	Barley	mitochondrion	94.77	75.52
HORVU3Hr1G061790.1	Barley	cytosol	99.35	74.88
Zm00001d011565_P002	Maize	cytosol, mitochondrion	96.73	74.37
KRH27335	Soybean	endoplasmic reticulum	73.2	74.17
TraesCS1B01G420600.1	Wheat	vacuole	84.31	62.93
Bra027688.1-P	Field mustard	cytosol	39.22	54.05
Bra029076.1-P	Field mustard	cytosol	47.71	49.32
Bra022645.1-P	Field mustard	cytosol	47.71	49.32
Bra041101.1-P	Field mustard	cytosol	47.06	48.65
Bra001347.1-P	Field mustard	cytosol	47.06	48.65
Bra003066.1-P	Field mustard	cytosol	47.06	48.65
Bra002842.1-P	Field mustard	cytosol	46.41	47.97
Bra035605.1-P	Field mustard	cytosol	45.75	47.3
Bra013049.1-P	Field mustard	cytosol	45.75	47.3
Bra028946.1-P	Field mustard	cytosol	41.83	45.71
Bra032244.1-P	Field mustard	cytosol	44.44	45.33
Bra027749.1-P	Field mustard	nucleus	41.18	41.45
Bra001995.1-P	Field mustard	cytosol	45.75	38.89
Bra026222.1-P	Field mustard	mitochondrion, nucleus	37.25	37.5
Bra017410.1-P	Field mustard	mitochondrion, nucleus	37.25	37.5
Bra016264.1-P	Field mustard	mitochondrion	37.25	37.5
Bra026582.1-P	Field mustard	mitochondrion, nucleus	36.6	36.84
Bra026833.1-P	Field mustard	mitochondrion, nucleus	36.6	36.84
Bra024808.1-P	Field mustard	mitochondrion, nucleus	36.6	36.84
Bra029252.1-P	Field mustard	mitochondrion, nucleus	35.95	36.67
Bra016704.1-P	Field mustard	nucleus	35.29	35.53
Bra027422.1-P	Field mustard	plastid	37.91	31.69
Bra016703.1-P	Field mustard	nucleus	36.6	26.67
Bra029711.1-P	Field mustard	nucleus	45.75	22.58

Protein Annotations

MapMan:19.2.2.1.4	Gene3D:3.10.110.10	EnsemblPlantsGene:Bra026018	EnsemblPlants:Bra026018.1	EnsemblPlants:Bra026018.1-P	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004842	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0005886	GO:GO:0006464
GO:GO:0006511	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009653
GO:GO:0009987	GO:GO:0010039	GO:GO:0010053	GO:GO:0016020	GO:GO:0016567	GO:GO:0016740
GO:GO:0019538	GO:GO:0030154	InterPro:IPR000608	InterPro:IPR016135	UniProt:M4EB59	PFAM:PF00179
ScanProsite:PS00183	PFscan:PS50127	PANTHER:PTHR43902	PANTHER:PTHR43902:SF4	SMART:SM00212	SUPFAM:SSF54495
InterPro:UBQ-conjugat_E2	InterPro:UBQ-conjugating_AS	InterPro:UBQ-conjugating_enzyme/RWD	UniParc:UPI000009F139	:	:

Description

AT1G16890 (E=2e-085) UBC36, UBC13B | ubiquitin-conjugating enzyme, putative

Coordinates

chrA06:-:6479195..6480977

Molecular Weight (calculated)

17220.8 Da

IEP (calculated)

7.508

GRAVY (calculated)

-0.319

Length

153 amino acids

Sequence
(BLAST)

001: MANSNLPRRI IKETQRLLSE PAPGISASPS EENMRYFNVM ILGPTQSPYE GGVFKLELFL PEEYPMAAPK VRFLTKIYHP NIDKLGRICL DILKDKWSPA
101: LQIRTVLLSI QALLSAPNPD DPLSENIAKH WKSNEAEAVE TAKEWTRLYA SGA

Best Arabidopsis Sequence Match ( AT1G16890.2 )
(BLAST)

001: MANSNLPRRI IKETQRLLSE PAPGISASPS EENMRYFNVM ILGPTQSPYE GGVFKLELFL PEEYPMAAPK VRFLTKIYHP NIDKLGRICL DILKDKWSPA
101: LQIRTVLLSI QALLSAPNPD DPLSENIAKH WKSNEAEAVE TAKEWTRLYA SGA

Arabidopsis Description

UBC36Ubiquitin-conjugating enzyme 36 [Source:UniProtKB/TrEMBL;Acc:F4I615]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.