Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G400600.1 | Wheat | cytosol | 100.0 | 100.0 |
| TraesCS3A01G271800.1 | Wheat | cytosol | 98.04 | 98.04 |
| Bra016626.1-P | Field mustard | cytosol | 98.04 | 98.04 |
| CDX87428 | Canola | cytosol | 98.04 | 98.04 |
| CDY26882 | Canola | cytosol | 92.81 | 97.93 |
| Bra035071.1-P | Field mustard | cytosol | 88.89 | 97.84 |
| CDX96802 | Canola | cytosol | 97.39 | 97.39 |
| Solyc10g007260.2.1 | Tomato | plastid | 97.39 | 97.39 |
| CDY54372 | Canola | cytosol | 97.39 | 97.39 |
| CDY35126 | Canola | cytosol | 97.39 | 97.39 |
| CDX88485 | Canola | cytosol | 97.39 | 97.39 |
| CDX83936 | Canola | cytosol | 97.39 | 97.39 |
| CDX81788 | Canola | cytosol | 97.39 | 97.39 |
| Bra026700.1-P | Field mustard | cytosol | 97.39 | 97.39 |
| Bra026018.1-P | Field mustard | cytosol | 97.39 | 97.39 |
| Bra008383.1-P | Field mustard | cytosol | 97.39 | 97.39 |
| CDY14587 | Canola | cytosol | 97.39 | 96.75 |
| CDY40025 | Canola | cytosol | 96.73 | 96.73 |
| PGSC0003DMT400054795 | Potato | cytosol | 96.73 | 96.73 |
| PGSC0003DMT400032251 | Potato | cytosol | 96.73 | 96.73 |
| KRH55097 | Soybean | endoplasmic reticulum | 96.73 | 96.73 |
| KRH21984 | Soybean | endoplasmic reticulum, nucleus | 96.73 | 96.73 |
| KRH26227 | Soybean | cytosol | 96.73 | 96.73 |
| AT1G78870.2 | Thale cress | cytosol | 96.08 | 96.08 |
| Solyc07g062570.2.1 | Tomato | plastid | 96.08 | 96.08 |
| CDY57941 | Canola | cytosol | 95.42 | 94.19 |
| TraesCS5A01G181700.1 | Wheat | cytosol | 93.46 | 93.46 |
| Zm00001d009552_P002 | Maize | cytosol | 96.73 | 93.08 |
| GSMUA_Achr4P31050_001 | Banana | cytosol | 45.75 | 92.11 |
| AT1G16890.3 | Thale cress | cytosol | 96.73 | 91.36 |
| Zm00001d038995_P001 | Maize | cytosol | 96.73 | 90.8 |
| HORVU1Hr1G086460.1 | Barley | endoplasmic reticulum, extracellular | 56.21 | 90.53 |
| HORVU1Hr1G086610.1 | Barley | cytosol, plastid | 100.0 | 87.93 |
| VIT_19s0014g01460.t01 | Wine grape | cytosol | 88.24 | 87.1 |
| CDX79272 | Canola | cytosol | 95.42 | 85.88 |
| HORVU1Hr1G086480.1 | Barley | mitochondrion | 97.39 | 77.6 |
| KRH27335 | Soybean | endoplasmic reticulum | 72.55 | 73.51 |
| TraesCS1B01G420600.1 | Wheat | vacuole | 86.93 | 64.88 |
| TraesCS5A01G177100.1 | Wheat | cytosol | 47.06 | 48.65 |
| TraesCS3A01G238400.1 | Wheat | cytosol | 46.41 | 48.3 |
| TraesCS7A01G343800.1 | Wheat | cytosol, nucleus, peroxisome | 46.41 | 47.97 |
| TraesCS6A01G071100.1 | Wheat | cytosol | 46.41 | 47.65 |
| TraesCS3A01G342500.1 | Wheat | cytosol, nucleus, peroxisome | 45.75 | 47.3 |
| TraesCS1A01G301600.1 | Wheat | cytosol, nucleus, peroxisome | 45.75 | 47.3 |
| TraesCS2A01G539800.1 | Wheat | cytosol | 45.1 | 46.62 |
| TraesCS3A01G487000.1 | Wheat | cytosol | 31.37 | 45.71 |
| TraesCS4A01G244100.1 | Wheat | peroxisome | 34.64 | 40.77 |
| TraesCS4A01G246700.1 | Wheat | peroxisome | 33.99 | 40.0 |
| TraesCS5A01G429000.1 | Wheat | mitochondrion, nucleus | 36.6 | 36.84 |
| TraesCS2A01G247700.1 | Wheat | nucleus | 36.6 | 36.84 |
| TraesCS3A01G112600.1 | Wheat | mitochondrion | 37.91 | 35.8 |
| TraesCS2A01G187000.1 | Wheat | plastid | 40.52 | 32.63 |
Protein Annotations
| EnsemblPlants:TraesCS1A01G392400.1 | EnsemblPlantsGene:TraesCS1A01G392400 | Gene3D:3.10.110.10 | InterPro:IPR000608 | InterPro:IPR016135 | InterPro:UBQ-conjugat_E2 |
| InterPro:UBQ-conjugating_AS | InterPro:UBQ-conjugating_enzyme/RWD | PANTHER:PTHR43902 | PANTHER:PTHR43902:SF4 | PFAM:PF00179 | PFscan:PS50127 |
| ScanProsite:PS00183 | SMART:SM00212 | SUPFAM:SSF54495 | TIGR:cd00195 | MapMan:19.2.2.1.4 | : |
Description
No Description!
Coordinates
chr1A:+:558976211..558979272
Molecular Weight (calculated)
17180.8 Da
IEP (calculated)
7.508
GRAVY (calculated)
-0.319
Length
153 amino acids
Sequence
(BLAST)
(BLAST)
001: MANSNLPRRI IKETQRLLSE PAPGISASPS EENMRYFNVM VLGPAQSPYE GGVFKLELFL PEEYPMAAPK VRFLTKIYHP NIDKLGRICL DILKDKWSPA
101: LQIRTVLLSI QALLSAPNPD DPLSENVAKH WKSNEAEAVE TAKEWTRMYA SGA
101: LQIRTVLLSI QALLSAPNPD DPLSENVAKH WKSNEAEAVE TAKEWTRMYA SGA
001: MANSNLPRRI IKETQRLLSE PAPGISASPS EENMRYFNVM ILGPTQSPYE GGVFKLELFL PEEYPMAAPK VRFLTKIYHP NIDKLGRICL DILKDKWSPA
101: LQIRTVLLSI QALLSAPNPD DPLSENIAKH WKSNEAEAVE TAKEWTRLYA SGA
101: LQIRTVLLSI QALLSAPNPD DPLSENIAKH WKSNEAEAVE TAKEWTRLYA SGA
Arabidopsis Description
UBC36Ubiquitin-conjugating enzyme 36 [Source:UniProtKB/TrEMBL;Acc:F4I615]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.