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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • plastid 1
  • cytosol 2
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
iPSORT:plastid
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:mitochondrion
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX88485 Canola cytosol 96.77 98.04
CDX87428 Canola cytosol 96.13 97.39
KRH21984 Soybean endoplasmic reticulum, nucleus 95.48 96.73
CDY54372 Canola cytosol 95.48 96.73
CDX83936 Canola cytosol 95.48 96.73
CDY26882 Canola cytosol 90.32 96.55
CDY14587 Canola cytosol 95.48 96.1
AT1G78870.2 Thale cress cytosol 94.84 96.08
TraesCS3A01G271800.1 Wheat cytosol 94.84 96.08
TraesCS3B01G305500.1 Wheat mitochondrion 94.84 96.08
TraesCS3D01G271400.1 Wheat cytosol 94.84 96.08
Solyc10g007260.2.1 Tomato plastid 94.84 96.08
CDX96802 Canola cytosol 94.84 96.08
Solyc07g062570.2.1 Tomato plastid 94.84 96.08
CDX81788 Canola cytosol 94.84 96.08
CDY35126 Canola cytosol 94.84 96.08
KRH26227 Soybean cytosol 94.19 95.42
TraesCS1A01G392400.1 Wheat cytosol 94.19 95.42
PGSC0003DMT400054795 Potato cytosol 94.19 95.42
CDY40025 Canola cytosol 94.19 95.42
TraesCS1D01G400600.1 Wheat cytosol 94.19 95.42
KRH55097 Soybean endoplasmic reticulum 94.19 95.42
PGSC0003DMT400032251 Potato cytosol 94.19 95.42
Os01t0673600-01 Rice extracellular, plasma membrane, plastid 93.55 94.77
EES03421 Sorghum cytosol 92.9 94.12
KXG35379 Sorghum cytosol 91.61 92.81
Zm00001d009552_P002 Maize cytosol 93.55 91.19
TraesCS5A01G181700.1 Wheat cytosol 89.03 90.2
TraesCS5B01G179700.1 Wheat cytosol 89.03 90.2
TraesCS5D01G186100.1 Wheat cytosol 89.03 90.2
HORVU5Hr1G055360.2 Barley cytosol, mitochondrion 89.03 89.03
Zm00001d038995_P001 Maize cytosol 93.55 88.96
CDX79272 Canola cytosol 97.42 88.82
GSMUA_Achr4P31050_001 Banana cytosol 42.58 86.84
HORVU1Hr1G086460.1 Barley endoplasmic reticulum, extracellular 52.9 86.32
VIT_19s0014g01460.t01 Wine grape cytosol 85.81 85.81
Zm00001d043905_P003 Maize cytosol 92.9 85.21
HORVU1Hr1G086610.1 Barley cytosol, plastid 94.19 83.91
HORVU1Hr1G086480.1 Barley mitochondrion 91.61 73.96
HORVU3Hr1G061790.1 Barley cytosol 94.84 72.41
Zm00001d011565_P002 Maize cytosol, mitochondrion 92.26 71.86
KRH27335 Soybean endoplasmic reticulum 69.68 71.52
TraesCS1B01G420600.1 Wheat vacuole 81.29 61.46
CDY37098 Canola cytosol 38.71 54.05
CDY23674 Canola cytosol 38.71 54.05
CDX73346 Canola cytosol 38.71 54.05
CDY35636 Canola cytosol 45.16 47.3
CDY34409 Canola cytosol 45.16 47.3
CDY25571 Canola cytosol 45.16 47.3
CDY51965 Canola cytosol 45.16 47.3
CDY14388 Canola cytosol 45.16 47.3
CDX76970 Canola cytosol 45.16 47.3
CDY47067 Canola cytosol 44.52 46.62
CDX89747 Canola cytosol 44.52 46.62
CDX96210 Canola cytosol 44.52 46.62
CDY49174 Canola cytosol 44.52 46.62
CDY17396 Canola cytosol 44.52 46.62
CDX71304 Canola cytosol, mitochondrion, nucleus 43.87 45.95
CDY31408 Canola cytosol 43.87 45.95
CDY02238 Canola cytosol 43.23 45.27
CDY68877 Canola cytosol, mitochondrion 45.16 43.75
CDY06521 Canola cytosol, plastid 45.16 43.75
CDY11958 Canola cytosol 45.16 40.46
CDY08368 Canola cytosol 40.0 38.99
CDY65274 Canola cytosol 36.13 38.36
CDY54342 Canola cytosol 44.52 37.5
CDY39315 Canola mitochondrion 35.48 36.18
CDY38184 Canola cytosol 41.29 35.56
CDY11654 Canola mitochondrion 34.84 35.53
CDY38761 Canola mitochondrion 34.84 35.53
CDY30726 Canola mitochondrion, nucleus 33.55 34.67
CDY66232 Canola mitochondrion, nucleus 33.55 34.67
CDY03040 Canola mitochondrion, nucleus 30.97 34.04
CDY06520 Canola cytosol 32.26 32.26
CDY23617 Canola plastid 38.06 32.24
CDY36778 Canola cytosol 44.52 31.8
CDY59253 Canola mitochondrion 37.42 31.69
CDX84034 Canola nucleus 21.29 30.84
CDY39254 Canola cytosol 22.58 30.17
CDX73344 Canola cytosol 30.97 29.27
CDY68969 Canola mitochondrion 26.45 28.28
CDX96859 Canola mitochondrion 34.19 28.04
Protein Annotations
MapMan:19.2.2.1.4Gene3D:3.10.110.10GO:A0A078J5G6UniProt:A0A078J5G6EnsemblPlants:CDY57941ProteinID:CDY57941
ProteinID:CDY57941.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005524
GO:GO:0016740EnsemblPlantsGene:GSBRNA2T00022870001InterPro:IPR000608InterPro:IPR016135PFAM:PF00179ScanProsite:PS00183
PFscan:PS50127PANTHER:PTHR43902PANTHER:PTHR43902:SF4MetaCyc:PWY-7511SMART:SM00212SUPFAM:SSF54495
InterPro:UBQ-conjugat_E2InterPro:UBQ-conjugating_ASInterPro:UBQ-conjugating_enzyme/RWDUniPathway:UPA00143UniParc:UPI0004EF308B:
Description
BnaA07g38410DBnaA07g38410D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J5G6]
Coordinates
chrLK033618:+:11368..13148
Molecular Weight (calculated)
17313.8 Da
IEP (calculated)
6.525
GRAVY (calculated)
-0.285
Length
155 amino acids
Sequence
(BLAST)
001: MANSNLPRRI IKETQRLLSE PAPGISASPS EDNMRYFNVM VLGPSQSPYE GGVFKLELFL PEEYPMSAPK ASCLFLTKIY HPNIDKLGRI CLDILKDKWS
101: PALQIRTVLL SIQALLSAPN PDDPLSENIA KHWKSNEAEA VETAKEWTRL YASGA
Best Arabidopsis Sequence Match ( AT1G16890.1 )
(BLAST)
001: MRYFNVMILG PTQSPYEGGV FKLELFLPEE YPMAAPKVRF LTKIYHPNID KLGRICLDIL KDKWSPALQI RTVLLSIQAL LSAPNPDDPL SENIAKHWKS
101: NEAEAVETAK EWTRLYASGA
Arabidopsis Description
UBC36Ubiquitin-conjugating enzyme 36 [Source:UniProtKB/TrEMBL;Acc:F4I615]
SUBAcon: [cytosol,vacuole,plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.