CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 4
nucleus 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra026700.1-P	Field mustard	cytosol	100.0	100.0
CDX83936	Canola	cytosol	100.0	100.0
TraesCS3D01G271400.1	Wheat	cytosol	99.35	99.35
TraesCS3B01G305500.1	Wheat	mitochondrion	99.35	99.35
TraesCS3A01G271800.1	Wheat	cytosol	99.35	99.35
Solyc10g007260.2.1	Tomato	plastid	99.35	99.35
CDX81788	Canola	cytosol	99.35	99.35
CDX87428	Canola	cytosol	99.35	99.35
CDY35126	Canola	cytosol	99.35	99.35
CDY40025	Canola	cytosol	98.69	98.69
PGSC0003DMT400054795	Potato	cytosol	98.69	98.69
PGSC0003DMT400032251	Potato	cytosol	98.69	98.69
KRH55097	Soybean	endoplasmic reticulum	98.69	98.69
KRH26227	Soybean	cytosol	98.69	98.69
KRH21984	Soybean	endoplasmic reticulum, nucleus	98.69	98.69
CDX88485	Canola	cytosol	98.69	98.69
CDY26882	Canola	cytosol	93.46	98.62
CDY14587	Canola	cytosol	98.69	98.05
CDX96802	Canola	cytosol	98.04	98.04
Solyc07g062570.2.1	Tomato	plastid	98.04	98.04
Os01t0673600-01	Rice	extracellular, plasma membrane, plastid	98.04	98.04
TraesCS1D01G400600.1	Wheat	cytosol	97.39	97.39
EES03421	Sorghum	cytosol	97.39	97.39
TraesCS1A01G392400.1	Wheat	cytosol	97.39	97.39
KXG35379	Sorghum	cytosol	96.08	96.08
CDY57941	Canola	cytosol	96.73	95.48
Zm00001d009552_P002	Maize	cytosol	98.04	94.34
TraesCS5A01G181700.1	Wheat	cytosol	93.46	93.46
TraesCS5B01G179700.1	Wheat	cytosol	93.46	93.46
TraesCS5D01G186100.1	Wheat	cytosol	93.46	93.46
AT1G16890.3	Thale cress	cytosol	98.69	93.21
HORVU5Hr1G055360.2	Barley	cytosol, mitochondrion	93.46	92.26
GSMUA_Achr4P31050_001	Banana	cytosol	45.75	92.11
Zm00001d038995_P001	Maize	cytosol	98.04	92.02
HORVU1Hr1G086460.1	Barley	endoplasmic reticulum, extracellular	54.9	88.42
Zm00001d043905_P003	Maize	cytosol	97.39	88.17
VIT_19s0014g01460.t01	Wine grape	cytosol	88.89	87.74
CDX79272	Canola	cytosol	96.73	87.06
HORVU1Hr1G086610.1	Barley	cytosol, plastid	97.39	85.63
HORVU1Hr1G086480.1	Barley	mitochondrion	94.77	75.52
HORVU3Hr1G061790.1	Barley	cytosol	99.35	74.88
Zm00001d011565_P002	Maize	cytosol, mitochondrion	96.73	74.37
KRH27335	Soybean	endoplasmic reticulum	72.55	73.51
TraesCS1B01G420600.1	Wheat	vacuole	84.31	62.93
CDY37098	Canola	cytosol	39.87	54.95
CDX73346	Canola	cytosol	39.87	54.95
CDY23674	Canola	cytosol	39.87	54.95
CDY35636	Canola	cytosol	47.71	49.32
CDY34409	Canola	cytosol	47.71	49.32
CDY25571	Canola	cytosol	47.71	49.32
CDY14388	Canola	cytosol	47.71	49.32
CDY49174	Canola	cytosol	47.06	48.65
CDY47067	Canola	cytosol	47.06	48.65
CDX89747	Canola	cytosol	47.06	48.65
CDX96210	Canola	cytosol	47.06	48.65
CDY51965	Canola	cytosol	46.41	47.97
CDX76970	Canola	cytosol	46.41	47.97
CDY31408	Canola	cytosol	46.41	47.97
CDX71304	Canola	cytosol, mitochondrion, nucleus	46.41	47.97
CDY02238	Canola	cytosol	45.75	47.3
CDY17396	Canola	cytosol	45.75	47.3
CDY68877	Canola	cytosol, mitochondrion	46.41	44.38
CDY06521	Canola	cytosol, plastid	46.41	44.38
CDY11958	Canola	cytosol	46.41	41.04
CDY08368	Canola	cytosol	42.48	40.88
CDY54342	Canola	cytosol	47.06	39.13
CDY65274	Canola	cytosol	37.25	39.04
CDY39315	Canola	mitochondrion	37.91	38.16
CDY38761	Canola	mitochondrion	37.25	37.5
CDY11654	Canola	mitochondrion	37.25	37.5
CDY38184	Canola	cytosol	43.79	37.22
CDY66232	Canola	mitochondrion, nucleus	35.95	36.67
CDY30726	Canola	mitochondrion, nucleus	35.95	36.67
CDY03040	Canola	mitochondrion, nucleus	32.03	34.75
CDY06520	Canola	cytosol	33.33	32.9
CDY23617	Canola	plastid	39.22	32.79
CDY36778	Canola	cytosol	45.75	32.26
CDY59253	Canola	mitochondrion	38.56	32.24
CDX84034	Canola	nucleus	22.22	31.78
CDY39254	Canola	cytosol	22.88	30.17
CDY68969	Canola	mitochondrion	28.1	29.66
CDX96859	Canola	mitochondrion	36.6	29.63
CDX73344	Canola	cytosol	31.37	29.27

Protein Annotations

MapMan:19.2.2.1.4	Gene3D:3.10.110.10	GO:A0A078IWK3	UniProt:A0A078IWK3	EnsemblPlants:CDY54372	ProteinID:CDY54372
ProteinID:CDY54372.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524
GO:GO:0016740	EnsemblPlantsGene:GSBRNA2T00013963001	InterPro:IPR000608	InterPro:IPR016135	PFAM:PF00179	ScanProsite:PS00183
PFscan:PS50127	PANTHER:PTHR43902	PANTHER:PTHR43902:SF4	MetaCyc:PWY-7511	SMART:SM00212	SUPFAM:SSF54495
InterPro:UBQ-conjugat_E2	InterPro:UBQ-conjugating_AS	InterPro:UBQ-conjugating_enzyme/RWD	UniPathway:UPA00143	UniParc:UPI0001BA82CC	:

Description

BnaAnng13030DBnaAnng13030D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IWK3]

Coordinates

chrLK033311:+:2809..4846

Molecular Weight (calculated)

17206.8 Da

IEP (calculated)

7.508

GRAVY (calculated)

-0.320

Length

153 amino acids

Sequence
(BLAST)

001: MANSNLPRRI IKETQRLLSE PAPGISASPS EENMRYFNVM ILGPSQSPYE GGVFKLELFL PEEYPMAAPK VRFLTKIYHP NIDKLGRICL DILKDKWSPA
101: LQIRTVLLSI QALLSAPNPD DPLSENIAKH WKSNEAEAVE TAKEWTRLYA SGA

Best Arabidopsis Sequence Match ( AT1G16890.2 )
(BLAST)

001: MANSNLPRRI IKETQRLLSE PAPGISASPS EENMRYFNVM ILGPTQSPYE GGVFKLELFL PEEYPMAAPK VRFLTKIYHP NIDKLGRICL DILKDKWSPA
101: LQIRTVLLSI QALLSAPNPD DPLSENIAKH WKSNEAEAVE TAKEWTRLYA SGA

Arabidopsis Description

UBC36Ubiquitin-conjugating enzyme 36 [Source:UniProtKB/TrEMBL;Acc:F4I615]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.