Factsheet for Zm00001d011565_P002

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES03421	Sorghum	cytosol	76.38	99.35
Os01t0673600-01	Rice	extracellular, plasma membrane, plastid	75.88	98.69
TraesCS3D01G271400.1	Wheat	cytosol	74.87	97.39
TraesCS3B01G305500.1	Wheat	mitochondrion	74.87	97.39
PGSC0003DMT400032251	Potato	cytosol	74.87	97.39
TraesCS3A01G271800.1	Wheat	cytosol	74.87	97.39
Solyc07g062570.2.1	Tomato	plastid	74.37	96.73
CDY54372	Canola	cytosol	74.37	96.73
CDY35126	Canola	cytosol	74.37	96.73
Solyc10g007260.2.1	Tomato	plastid	74.37	96.73
CDX83936	Canola	cytosol	74.37	96.73
CDX81788	Canola	cytosol	74.37	96.73
Bra026700.1-P	Field mustard	cytosol	74.37	96.73
Bra026018.1-P	Field mustard	cytosol	74.37	96.73
CDY26882	Canola	cytosol	70.35	96.55
CDX87428	Canola	cytosol	73.87	96.08
PGSC0003DMT400054795	Potato	cytosol	73.87	96.08
CDY40025	Canola	cytosol	73.87	96.08
Bra016626.1-P	Field mustard	cytosol	73.87	96.08
KRH55097	Soybean	endoplasmic reticulum	73.87	96.08
KRH21984	Soybean	endoplasmic reticulum, nucleus	73.87	96.08
KRH26227	Soybean	cytosol	73.87	96.08
Bra035071.1-P	Field mustard	cytosol	66.83	95.68
AT1G78870.2	Thale cress	cytosol	73.37	95.42
CDX96802	Canola	cytosol	73.37	95.42
CDX88485	Canola	cytosol	73.37	95.42
Bra008383.1-P	Field mustard	cytosol	73.37	95.42
Zm00001d009552_P002	Maize	cytosol	75.88	94.97
CDY14587	Canola	cytosol	73.37	94.81
CDY57941	Canola	cytosol	71.86	92.26
GSMUA_Achr4P31050_001	Banana	cytosol	35.18	92.11
Zm00001d038995_P001	Maize	cytosol	74.87	91.41
AT1G16890.3	Thale cress	cytosol	73.87	90.74
Zm00001d043905_P003	Maize	cytosol	75.38	88.76
VIT_19s0014g01460.t01	Wine grape	cytosol	66.83	85.81
CDX79272	Canola	cytosol	71.86	84.12
KRH27335	Soybean	endoplasmic reticulum	55.78	73.51
HORVU3Hr1G061790.1	Barley	cytosol	74.87	73.4
Zm00001d019981_P003	Maize	cytosol	36.18	48.65
Zm00001d043070_P001	Maize	cytosol, nucleus, peroxisome	35.68	47.97
Zm00001d012513_P001	Maize	mitochondrion	35.68	47.97
Zm00001d053897_P001	Maize	mitochondrion	35.18	47.3
Zm00001d001913_P001	Maize	cytosol	35.18	47.3
Zm00001d010618_P003	Maize	cytosol	35.68	43.56
Zm00001d005532_P003	Maize	cytosol, mitochondrion	36.18	39.34
Zm00001d011500_P014	Maize	cytosol	30.65	37.65
Zm00001d034404_P001	Maize	mitochondrion	28.14	34.57
Zm00001d021904_P001	Maize	plastid	30.65	33.15
Zm00001d037052_P001	Maize	cytosol	26.13	32.7
Zm00001d013092_P002	Maize	mitochondrion	28.14	32.18
Zm00001d036054_P001	Maize	cytosol, nucleus, plastid	28.64	32.02
Zm00001d043998_P001	Maize	cytosol	35.18	29.79
Zm00001d007897_P002	Maize	mitochondrion	28.64	26.64
Zm00001d018884_P002	Maize	mitochondrion	28.14	25.23

Protein Annotations

EnsemblPlants:Zm00001d011565_P002	EnsemblPlants:Zm00001d011565_T002	EnsemblPlantsGene:Zm00001d011565	EntrezGene:101202705	Gene3D:3.10.110.10	InterPro:IPR000608
InterPro:IPR016135	InterPro:UBQ-conjugat_E2	InterPro:UBQ-conjugating_enzyme/RWD	PANTHER:PTHR43902	PANTHER:PTHR43902:SF4	PFAM:PF00179
PFscan:PS50127	ProteinID:AQK97238.1	SMART:SM00212	SUPFAM:SSF54495	UniParc:UPI0008456255	UniProt:A0A1D6G1D6
MapMan:19.2.2.1.4	:	:	:	:	:

Description

Putative ubiquitin-conjugating enzyme family%3B Ubiquitin-conjugating enzyme E2 N

Coordinates

chr8:-:154584801..154588468

Molecular Weight (calculated)

22320.0 Da

IEP (calculated)

6.790

GRAVY (calculated)

-0.136

Length

199 amino acids

Sequence
(BLAST)

001: MANSNLPRRI IKETQRLLSE PAPGISASPS EENMRYFNVM ILGPAQSPYE VVILECFQIS IVESNQFFSK DATGNGRNAE MFALVYAHIG GVFKLELFLP
101: EEYPMAAPKV RFLTKIYHPN IDKSRTSLLQ LGRICLDILK DKWSPALQIR TVLLSIQALL SAPNPDDPLS DNIAKHWKAN EVEAVETAKE WTRLYASGA

Best Arabidopsis Sequence Match ( AT1G16890.1 )
(BLAST)

001: MRYFNVMILG PTQSPYEGGV FKLELFLPEE YPMAAPKVRF LTKIYHPNID KLGRICLDIL KDKWSPALQI RTVLLSIQAL LSAPNPDDPL SENIAKHWKS
101: NEAEAVETAK EWTRLYASGA

Arabidopsis Description

UBC36Ubiquitin-conjugating enzyme 36 [Source:UniProtKB/TrEMBL;Acc:F4I615]
SUBAcon: [plastid,vacuole,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.