Factsheet for Zm00001d011500_P014

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d001913_P001	Maize	cytosol	69.14	75.68
Zm00001d043070_P001	Maize	cytosol, nucleus, peroxisome	68.52	75.0
Zm00001d012513_P001	Maize	mitochondrion	68.52	75.0
Zm00001d053897_P001	Maize	mitochondrion	66.05	72.3
Zm00001d019981_P003	Maize	cytosol	66.05	72.3
Zm00001d010618_P003	Maize	cytosol	67.9	67.48
Zm00001d037052_P001	Maize	cytosol	60.49	61.64
Zm00001d005532_P003	Maize	cytosol, mitochondrion	66.05	58.47
Zm00001d043998_P001	Maize	cytosol	74.69	51.49
GSMUA_Achr5P04210_001	Banana	cytosol	43.83	42.01
Zm00001d009552_P002	Maize	cytosol	38.89	39.62
Zm00001d038995_P001	Maize	cytosol	38.89	38.65
Zm00001d043905_P003	Maize	cytosol	38.89	37.28
Zm00001d021904_P001	Maize	plastid	40.74	35.87
Zm00001d034404_P001	Maize	mitochondrion	34.57	34.57
Zm00001d013092_P002	Maize	mitochondrion	35.19	32.76
Zm00001d036054_P001	Maize	cytosol, nucleus, plastid	33.95	30.9
Zm00001d011565_P002	Maize	cytosol, mitochondrion	37.65	30.65
Zm00001d007897_P002	Maize	mitochondrion	35.19	26.64
Zm00001d018884_P002	Maize	mitochondrion	35.19	25.68

Protein Annotations

EntrezGene:100286223	MapMan:19.2.2.5.2	Gene3D:3.10.110.10	UniProt:A0A1D6G0U5	ProteinID:AQK97075.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0016740	InterPro:IPR000608
InterPro:IPR016135	PFAM:PF00179	ScanProsite:PS00183	PFscan:PS50127	PANTHER:PTHR24068	PANTHER:PTHR24068:SF122
SMART:SM00212	SUPFAM:SSF54495	InterPro:UBQ-conjugat_E2	InterPro:UBQ-conjugating_AS	InterPro:UBQ-conjugating_enzyme/RWD	UniParc:UPI000843D102
EnsemblPlantsGene:Zm00001d011500	EnsemblPlants:Zm00001d011500_P014	EnsemblPlants:Zm00001d011500_T014	SEG:seg	:	:

Description

Putative ubiquitin-conjugating enzyme family isoform 1%3B Putative ubiquitin-conjugating enzyme family isoform 2%3B Putative ubiquitin-conjugating enzyme family isoform 3%3B Ubiquitin-conjugating enzyme E2-17 kDa 9

Coordinates

chr8:-:152633631..152635936

Molecular Weight (calculated)

17465.3 Da

IEP (calculated)

8.491

GRAVY (calculated)

0.163

Length

162 amino acids

Sequence
(BLAST)

001: MASKRIQKEL KDLQKDPPTS CSAGPVGEDI FHWQATIMGP SDSPYSGGVF LVTIHFPPDY PFKPPKVAFR TKVFHPNINS NGSICLDILK DQWSPALTIS
101: KVLLSICSLL TGPRGTPCRE GVPYLALWGS AGIAAAATGR VSVYSILCCI MMHQIGFAVQ CA

Best Arabidopsis Sequence Match ( AT1G64230.1 )
(BLAST)

001: MASKRILKEL KDLQKDPPTS CSAGPVAEDM FHWQATIMGP SDSPYSGGVF LVTIHFPPDY PFKPPKVAFR TKVFHPNVNS NGSICLDILK EQWSPALTIS
101: KVLLSICSLL TDPNPDDPLV PEIAHMYKTD RAKYESTARS WTQKYAMG

Arabidopsis Description

UBC28Ubiquitin-conjugating enzyme 28 [Source:UniProtKB/TrEMBL;Acc:F4I5B8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.