Factsheet for Zm00001d013092_P002

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, nucleus, secretory
MultiLoc:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG37384	Sorghum	mitochondrion, nucleus	87.36	100.0
PGSC0003DMT400046771	Potato	mitochondrion, nucleus	85.63	98.03
TraesCS2A01G247700.1	Wheat	nucleus	85.63	98.03
Solyc03g113100.2.1	Tomato	mitochondrion, nucleus	83.33	95.39
Zm00001d034404_P001	Maize	mitochondrion	86.21	92.59
Zm00001d036054_P001	Maize	cytosol, nucleus, plastid	85.06	83.15
GSMUA_Achr2P16860_001	Banana	endoplasmic reticulum, golgi	86.21	77.32
Zm00001d007897_P002	Maize	mitochondrion	84.48	68.69
Zm00001d018884_P002	Maize	mitochondrion	85.63	67.12
Zm00001d012513_P001	Maize	mitochondrion	36.78	43.24
Zm00001d043070_P001	Maize	cytosol, nucleus, peroxisome	36.78	43.24
Zm00001d001913_P001	Maize	cytosol	36.78	43.24
Zm00001d053897_P001	Maize	mitochondrion	35.63	41.89
Zm00001d019981_P003	Maize	cytosol	35.06	41.22
Zm00001d010618_P003	Maize	cytosol	37.36	39.88
Zm00001d009552_P002	Maize	cytosol	32.76	35.85
Zm00001d038995_P001	Maize	cytosol	33.33	35.58
Zm00001d011500_P014	Maize	cytosol	32.76	35.19
Zm00001d043905_P003	Maize	cytosol	32.76	33.73
Zm00001d005532_P003	Maize	cytosol, mitochondrion	35.06	33.33
Zm00001d037052_P001	Maize	cytosol	29.89	32.7
Zm00001d011565_P002	Maize	cytosol, mitochondrion	32.18	28.14
Zm00001d043998_P001	Maize	cytosol	36.78	27.23
Zm00001d021904_P001	Maize	plastid	26.44	25.0

Protein Annotations

EntrezGene:100193988	MapMan:19.2.2.1.4	Gene3D:3.10.110.10	UniProt:A0A1D6GFR2	ProteinID:AQK62408.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0016740	InterPro:IPR000608
InterPro:IPR016135	PFAM:PF00179	ScanProsite:PS00183	PFscan:PS50127	PANTHER:PTHR43898	PANTHER:PTHR43898:SF2
SMART:SM00212	SUPFAM:SSF54495	InterPro:UBQ-conjugat_E2	InterPro:UBQ-conjugating_AS	InterPro:UBQ-conjugating_enzyme/RWD	UniParc:UPI000842782F
EnsemblPlantsGene:Zm00001d013092	EnsemblPlants:Zm00001d013092_P002	EnsemblPlants:Zm00001d013092_T002	:	:	:

Description

Ubiquitin-conjugating enzyme E2 2

Coordinates

chr5:-:4601112..4605969

Molecular Weight (calculated)

19829.6 Da

IEP (calculated)

5.764

GRAVY (calculated)

-0.313

Length

174 amino acids

Sequence
(BLAST)

001: MSTPARKRLM RDFKRLQQDP PAGISGAPHD NNIMLWNAVI FGPDDTPWDG EQTVCFLILT VSLLTYVKFT LVGTFKLTLQ FTEDYPNKPP TVRFVSRMFH
101: PNIYADGSIC LDILQNQWSP IYDVAAILTS IQSLLCDPNP NSPANSEAAR MFSENKREYN RKVREVVEQS WTAD

Best Arabidopsis Sequence Match ( AT1G14400.2 )
(BLAST)

001: MSTPARKRLM RDFKRLQQDP PAGISGAPQD NNIMLWNAVI FGPDDTPWDG GTFKLSLQFS EDYPNKPPTV RFVSRMFHPN IYADGSICLD ILQNQWSPIY
101: DVAAILTSIQ SLLCDPNPNS PANSEAARMY SESKREYNRR VRDVVEQSWT AD

Arabidopsis Description

UBC1Ubiquitin-conjugating enzyme E2 1 [Source:UniProtKB/Swiss-Prot;Acc:P25865]
SUBAcon: [mitochondrion,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.