Factsheet for Zm00001d034404_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 3
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, nucleus
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH45858	Soybean	mitochondrion, nucleus	91.98	98.03
PGSC0003DMT400046771	Potato	mitochondrion, nucleus	91.98	98.03
Os03t0791800-01	Rice	mitochondrion, nucleus	90.74	96.71
TraesCS2A01G247700.1	Wheat	nucleus	90.74	96.71
GSMUA_Achr6P04830_001	Banana	cytosol, nucleus, plastid	84.57	95.8
Solyc03g113100.2.1	Tomato	mitochondrion, nucleus	88.89	94.74
Zm00001d013092_P002	Maize	mitochondrion	92.59	86.21
Zm00001d036054_P001	Maize	cytosol, nucleus, plastid	90.74	82.58
Zm00001d007897_P002	Maize	mitochondrion	88.89	67.29
Zm00001d018884_P002	Maize	mitochondrion	90.74	66.22
Zm00001d001913_P001	Maize	cytosol	38.89	42.57
Zm00001d043070_P001	Maize	cytosol, nucleus, peroxisome	38.89	42.57
Zm00001d012513_P001	Maize	mitochondrion	38.89	42.57
VIT_14s0108g00140.t01	Wine grape	cytosol, plastid	55.56	41.47
Zm00001d053897_P001	Maize	mitochondrion	37.65	41.22
Zm00001d019981_P003	Maize	cytosol	37.04	40.54
Zm00001d010618_P003	Maize	cytosol	39.51	39.26
Zm00001d009552_P002	Maize	cytosol	35.19	35.85
Zm00001d038995_P001	Maize	cytosol	35.8	35.58
Zm00001d011500_P014	Maize	cytosol	34.57	34.57
Zm00001d043905_P003	Maize	cytosol	35.19	33.73
Zm00001d005532_P003	Maize	cytosol, mitochondrion	37.04	32.79
Zm00001d037052_P001	Maize	cytosol	31.48	32.08
Zm00001d011565_P002	Maize	cytosol, mitochondrion	34.57	28.14
Zm00001d043998_P001	Maize	cytosol	38.89	26.81
Zm00001d021904_P001	Maize	plastid	27.78	24.46

Protein Annotations

EntrezGene:100192052	MapMan:19.2.2.1.4	Gene3D:3.10.110.10	UniProt:A0A1D6L7C0	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0016740	InterPro:IPR000608	InterPro:IPR016135
ProteinID:ONM10154.1	PFAM:PF00179	ScanProsite:PS00183	PFscan:PS50127	PANTHER:PTHR43898	PANTHER:PTHR43898:SF2
SMART:SM00212	SUPFAM:SSF54495	InterPro:UBQ-conjugat_E2	InterPro:UBQ-conjugating_AS	InterPro:UBQ-conjugating_enzyme/RWD	UniParc:UPI0004DE96AA
EnsemblPlantsGene:Zm00001d034404	EnsemblPlants:Zm00001d034404_P001	EnsemblPlants:Zm00001d034404_T001	:	:	:

Description

Ubiquitin-conjugating enzyme E2 2

Coordinates

chr1:+:292037126..292041508

Molecular Weight (calculated)

18541.9 Da

IEP (calculated)

5.215

GRAVY (calculated)

-0.554

Length

162 amino acids

Sequence
(BLAST)

001: MSTPARKRLM RDFKRLQQDP PAGISGAPYD NNIMLWNAVI FGYQPAYFCD VRPDDTPWDG GTFKLTLQCT EDYPNKPPTV RFVSRMFHPN IYADGSICLD
101: ILQNQWSPIY DVAAILTSIQ SLLCDPNPNS PANSEAARMF SENKREYNRK VREVVEQSWT AD

Best Arabidopsis Sequence Match ( AT1G14400.2 )
(BLAST)

001: MSTPARKRLM RDFKRLQQDP PAGISGAPQD NNIMLWNAVI FGPDDTPWDG GTFKLSLQFS EDYPNKPPTV RFVSRMFHPN IYADGSICLD ILQNQWSPIY
101: DVAAILTSIQ SLLCDPNPNS PANSEAARMY SESKREYNRR VRDVVEQSWT AD

Arabidopsis Description

UBC1Ubiquitin-conjugating enzyme E2 1 [Source:UniProtKB/Swiss-Prot;Acc:P25865]
SUBAcon: [mitochondrion,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.