CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 4
nucleus 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0673600-01	Rice	extracellular, plasma membrane, plastid	99.35	99.35
TraesCS3D01G271400.1	Wheat	cytosol	98.04	98.04
TraesCS3B01G305500.1	Wheat	mitochondrion	98.04	98.04
TraesCS3A01G271800.1	Wheat	cytosol	98.04	98.04
PGSC0003DMT400032251	Potato	cytosol	98.04	98.04
CDX83936	Canola	cytosol	97.39	97.39
CDY54372	Canola	cytosol	97.39	97.39
CDY35126	Canola	cytosol	97.39	97.39
Solyc10g007260.2.1	Tomato	plastid	97.39	97.39
Solyc07g062570.2.1	Tomato	plastid	97.39	97.39
CDX81788	Canola	cytosol	97.39	97.39
Bra026700.1-P	Field mustard	cytosol	97.39	97.39
Bra026018.1-P	Field mustard	cytosol	97.39	97.39
PGSC0003DMT400054795	Potato	cytosol	96.73	96.73
CDY40025	Canola	cytosol	96.73	96.73
KRH21984	Soybean	endoplasmic reticulum, nucleus	96.73	96.73
KRH26227	Soybean	cytosol	96.73	96.73
KRH55097	Soybean	endoplasmic reticulum	96.73	96.73
CDX87428	Canola	cytosol	96.73	96.73
Bra016626.1-P	Field mustard	cytosol	96.73	96.73
CDY26882	Canola	cytosol	91.5	96.55
Bra035071.1-P	Field mustard	cytosol	87.58	96.4
CDX96802	Canola	cytosol	96.08	96.08
CDX88485	Canola	cytosol	96.08	96.08
Bra008383.1-P	Field mustard	cytosol	96.08	96.08
KXG35379	Sorghum	cytosol	96.08	96.08
AT1G78870.2	Thale cress	cytosol	96.08	96.08
CDY14587	Canola	cytosol	96.08	95.45
GSMUA_Achr4P31050_001	Banana	cytosol	46.41	93.42
CDY57941	Canola	cytosol	94.12	92.9
AT1G16890.3	Thale cress	cytosol	96.73	91.36
Zm00001d043905_P003	Maize	cytosol	98.69	89.35
VIT_19s0014g01460.t01	Wine grape	cytosol	87.58	86.45
CDX79272	Canola	cytosol	94.12	84.71
Zm00001d011565_P002	Maize	cytosol, mitochondrion	99.35	76.38
KRH27335	Soybean	endoplasmic reticulum	73.2	74.17
HORVU3Hr1G061790.1	Barley	cytosol	98.04	73.89
KXG33034	Sorghum	cytosol	47.71	49.66
EER98641	Sorghum	cytosol	47.71	49.32
EES19701	Sorghum	cytosol	47.06	48.65
EES01663	Sorghum	cytosol, nucleus, peroxisome	47.06	48.65
EER89829	Sorghum	cytosol	47.06	48.65
KXG29317	Sorghum	nucleus	46.41	47.97
EES13053	Sorghum	cytosol	46.41	47.97
KXG37384	Sorghum	mitochondrion, nucleus	37.25	37.5
EER98036	Sorghum	mitochondrion, nucleus	37.25	37.5
EER97436	Sorghum	plastid	41.83	34.22
KXG31665	Sorghum	cytosol	37.91	32.58

Protein Annotations

MapMan:19.2.2.1.4	Gene3D:3.10.110.10	EntrezGene:8068001	UniProt:C5XG33	EnsemblPlants:EES03421	ProteinID:EES03421
ProteinID:EES03421.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737
GO:GO:0006139	GO:GO:0006259	GO:GO:0006301	GO:GO:0006464	GO:GO:0006511	GO:GO:0006950
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009653	GO:GO:0009987
GO:GO:0010039	GO:GO:0010053	GO:GO:0016740	GO:GO:0019538	GO:GO:0030154	GO:GO:0031625
GO:GO:0046686	GO:GO:0061630	GO:GO:0070534	InterPro:IPR000608	InterPro:IPR016135	PFAM:PF00179
ScanProsite:PS00183	PFscan:PS50127	PANTHER:PTHR43902	PANTHER:PTHR43902:SF4	MetaCyc:PWY-7511	SMART:SM00212
EnsemblPlantsGene:SORBI_3003G253000	SUPFAM:SSF54495	unigene:Sbi.3347	InterPro:UBQ-conjugat_E2	InterPro:UBQ-conjugating_AS	InterPro:UBQ-conjugating_enzyme/RWD
UniParc:UPI000182B921	RefSeq:XP_002458301.1	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:59181168..59185308

Molecular Weight (calculated)

17188.8 Da

IEP (calculated)

7.508

GRAVY (calculated)

-0.270

Length

153 amino acids

Sequence
(BLAST)

001: MANSNLPRRI IKETQRLLSE PAPGISASPS EENMRYFNVM ILGPAQSPYE GGVFKLELFL PEEYPMAAPK VRFLTKIYHP NIDKLGRICL DILKDKWSPA
101: LQIRTVLLSI QALLSAPNPD DPLSDNIAKH WKANEVEAVE TAKEWTRLYA SGA

Best Arabidopsis Sequence Match ( AT1G16890.2 )
(BLAST)

001: MANSNLPRRI IKETQRLLSE PAPGISASPS EENMRYFNVM ILGPTQSPYE GGVFKLELFL PEEYPMAAPK VRFLTKIYHP NIDKLGRICL DILKDKWSPA
101: LQIRTVLLSI QALLSAPNPD DPLSENIAKH WKSNEAEAVE TAKEWTRLYA SGA

Arabidopsis Description

UBC36Ubiquitin-conjugating enzyme 36 [Source:UniProtKB/TrEMBL;Acc:F4I615]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.